Citrobacter arsenatis: E1B03_04835
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Entry
E1B03_04835 CDS
T07503
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cars
Citrobacter arsenatis
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cars03021
]
E1B03_04835 (rapA)
Transcription machinery [BR:
cars03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
E1B03_04835 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QBM21785
UniProt:
A0A4P6WJI6
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All DBs
Position
complement(810946..813852)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFSSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHVDEVKEENGLLAYIGTRLDTEETGVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFETEQLVICSLDFARRSKQRLEHLCDAEWDLLIVDEAHHLVWSEDAPSREYMAVE
QLAERVPGILLLTATPEQLGLESHFARLRLLDPSRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNNELNMLGDMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPRRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVMLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDTVYNNLIGYLAEPENT
DGFDDLIKTCREQHDALKAQLEQGRDRLLEIHSNGGEKAQRLTESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEKSAR
ALIDAARKEADEKLTAELSRLEALRAVNPNIRDDELSAIESNRQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaattgggacttggt
actgttgtcgccatggatgcgcgaactgtcactttacttttctcatcgacgggcgaaaac
cgtctgtatgcgcgcagtgattcccccgtgacccgcgtgatgttcaatcctggtgatacg
ataacgagccatgaaggctggcagctgcatgtcgatgaagtaaaagaagaaaacggactg
cttgcctatatcggaacccgccttgataccgaagaaaccggtgtaacgctgcgtgaagtg
ctgctcgacagcaaactggtattcagcaaaccacaggatcgcctgtttgccggtcagatt
gaccgtatggaccgctttgcgctgcgctatcgcgcgcgtaaatttcagagcgaacagtat
cggatgccgtggagtggtttgcgtggtcagcgcaccagcctgattccccaccagctcaac
attgcccatgatgttggccgccgccacgcccctcgcgttctgctggctgatgaagttggt
ttaggtaaaaccattgaagccgggatgatcctgcatcaacagttgctgtcaggcgccgca
gagcgcgttctgatcatcgtcccggagacgttacagcaccagtggctggtcgaaatgctg
cgccgtttcaacctgcgctttgcgctgtttgatgatgagcgttacgcagaagcgcagcac
gacgcctacaacccgtttgaaaccgaacagttagttatttgttcgctggactttgctcgt
cgcagtaaacagcgtctggagcacctgtgtgatgctgaatgggatctgctgattgtcgat
gaagcccatcacctggtgtggagcgaagatgcacccagccgtgaatatatggccgttgaa
cagctggcagagcgcgtgccgggtatcctgctgctgaccgcaacgccagaacaactgggt
ctggaaagccactttgcgcgcctgcgcctgctggacccaagtcgcttccacgatttcgcc
cagtttgttgaagaacaaaaaaattaccgtccggtcgccgacgccgtcgccatgctgctg
gctggcaacaagctgagcaacaatgagctgaacatgctaggcgacatgattggcgaacag
gacattgagccgttattacaggcggcaaacagcgacagcgaagacgcccagagcgcgcgt
caggagctggtttcgatgctgatggaccgtcacggcaccagccgcgtgctgttccgtaac
acccgtaacggggtgaaaggcttcccgagacgcgaactgcataccatcaagctgcctttg
ccaacccaataccagacggcgattaaagtctccggcattatgggcgcacgtaagagtgcg
gaagaccgcgcgcgcgacatgctctacccggaacagatttatcaggaattcgaaggcgat
accggtacctggtggaactttgacccacgcgtggaatggctgatgggctacctgaccagc
caccgctcgcaaaaagtgttggttatctgcgcgaaagccaccaccgcgctgcagcttgaa
caggtactgcgcgagcgcgaaggtatccgcgccgccgtgttccatgaagggatgtcgatc
attgaacgagaccgtgctgcggcctggtttagcgaagaagatagcggagcccaggtgatg
ctgtgttctgaaatcggctccgaagggcgtaacttccagttcgccagcaatctggtgatg
tttgatctaccgttcaacccggacctgctggagcagcgtattggccgtctggaccgtatt
ggtcaggcgcatgatatccagatccacgttccatacctggaaaaaaccgcgcaatccgtg
ctggtgcgctggtaccacgaaggtctggatgcgttcgaacacacctgcccgaccggacgc
accatctatgacacggtctataacaatctgatcggctacctggcggagccagaaaacact
gatggctttgacgatctgatcaagacctgccgcgaacagcatgacgcgctgaaagcacaa
ctggagcaagggcgcgatcgcctgctggagatccactcgaacggcggcgaaaaagcgcaa
cggcttaccgaaagtattgaagagcaggacgacgataccagcctgatcgccttcgcgatg
aacctgtttgatatcgttggtattaatcaggatgaccgtggcgacaatttaatcgtgctg
acaccgtccgatcatatgctggtgccagatttccctgggctgccggaagatggctgcacc
attacgtttgagcgtgatgtcgccctgtcgcgtgaagacgcgcagtttattacctgggaa
catccgctgatccgtaatggtctggatctgatcctctccggcgacaccggcagcagcacc
atttcgttattgaaaaacaaagcattaccggtcggtactctgctggttgaactggtctac
gttgtggaagcgcaagcgccgaagcagctgcagttgaaccgcttcctgccgccaacgccg
gtacgtatgctgctggataaaaacggcaataaccttgccgcacaggttgaattcgaaacc
tttaaccgtcagctcagcgccgttaaccgccacactggcagtaaactggtcaacgccgtc
cagcaggatgttcatgccattctgcaactgggcgaagcacaggtggaaaaatcggcccgc
gcgctgatcgatgcggcgcgtaaagaagcagacgagaaactgacagcagaactctcccgt
ctggaagcgctgcgcgccgttaacccgaacatccgtgatgacgaactcagcgccattgaa
agcaaccgtcagcaggtgatggaaagcctggatcaggcaggctggcgtctggatgccctg
cgcctgatcgtcgtgacgcatcagtaa
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