Citrobacter arsenatis: E1B03_05420
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Entry
E1B03_05420 CDS
T07503
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cars
Citrobacter arsenatis
Pathway
cars03030
DNA replication
cars03430
Mismatch repair
cars03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E1B03_05420 (dnaE)
03430 Mismatch repair
E1B03_05420 (dnaE)
03440 Homologous recombination
E1B03_05420 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cars03032
]
E1B03_05420 (dnaE)
03400 DNA repair and recombination proteins [BR:
cars03400
]
E1B03_05420 (dnaE)
Enzymes [BR:
cars01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E1B03_05420 (dnaE)
DNA replication proteins [BR:
cars03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E1B03_05420 (dnaE)
DNA repair and recombination proteins [BR:
cars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E1B03_05420 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QBM21899
UniProt:
A0A4P6WFV8
LinkDB
All DBs
Position
950401..953883
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFHVRSELLGDELAQLTVLAANNTGYQNLTLLISKAYQRGYGAEGPVIDRDW
LGELKEGLILLSGGRMGDVGRCLLRGNSALVDECVAFYEEHFPNCYFLELIRTGRQDEEN
YLHAAVELAETRGLPVVATNDVRFLETGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEDEMCELFSDIPEALQNTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSREGL
EERLEFLFPDPEVRAQKRPPYDERLEVELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKRGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLNDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCTPWPEQVVLEGERETLGLY
LTGHPINQYLKEIERYVGGHRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacctcgtttcgtccacctgcgggtgcacagcgactactccatgatcgatggg
ctggcgaaaaccgggccgctggtgaaaaaggcggccgcgttaggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggtctggtgaagttttacggagcgggtcacggtgcg
ggtatcaaaccgatagtcggtgcagattttcatgttcgtagcgaactgttgggcgatgaa
ctcgctcagctcaccgtgctggccgcaaacaatactggctatcagaacctgacgttgttg
atttcaaaagcctatcagcgtggttatggcgcagaagggccggttatcgacagggactgg
ctgggcgagctaaaagaaggtttgattttgctctccggcggtcgcatgggcgacgttggt
cgctgcctgctgcgcggtaatagcgcactggttgatgaatgcgtggcgttttacgaagaa
catttccccaattgctatttcctcgagctgatccgcaccggcaggcaagatgaagaaaat
tatctgcatgcagcagtagaactggctgaaacgcgtggtcttccggtggtggcgaccaat
gatgttcgtttccttgaaaccggtgattttgacgcgcatgaaatccgcgtggcaatccac
gacggattcactcttgacgatcctaaacgcccgcgaaactattcgccgcagcagtatatg
cgcagcgaagacgagatgtgcgagctgttctccgatatcccggaggcactgcaaaacacc
gttgagatcgctaaacgctgtaacgtgacggtgcgtctgggcgagtatttcctgccgcag
tttccgaccggtgatatgaccactgaggatttcctcgtggcaaaatcacgcgaaggtctg
gaagaacgtctggaatttttgtttcctgatccagaagttcgcgcgcagaagcgcccgcct
tatgacgaacgtctggaggttgaacttaaagttatcaaccagatggggttccccggctac
ttcctgatcgttatggaatttatccagtggtcgaaagataacggagtaccggtaggcccg
ggacgtggttccggtgccggttcgcttgtcgcctatgcgctgaaaattaccgacctggat
ccgctggagtttgacctgctgttcgaacgtttcctgaacccggaacgtgtttcaatgccc
gacttcgacgttgacttctgtatggagaaacgcgatcaggtcattgagcacgtggcggaa
atgtacggtcgtgatgcggtttcgcagattattaccttcggtacgatggcggctaaagcg
gttatccgcgacgtgggccgcgtgctcggtcatccctacggcttcgttgatcgtatttcg
aaactggtgccgcccgacccgggcatgacgctggcgaaagccttcgaagctgaaccccaa
ctgccggaaatctatgaggcagatgaagaggttaaagcgctgatcgatatggcgcgtaag
ctggaaggcgtcacacgtaacgccggtaagcacgccggtggtgtggttatcgccccgacc
aaaattaccgattttgcgccgctgtattgcgatgaacaggggctacacccggttactcag
tttgataagaacgatgtggaatatgccggccttgtgaagtttgacttcctcggcctgcgt
acgctcactatcatcaactgggcgctggaaatgatcaacgcgcgccgtgagaagaacggc
gagccgccgctggatatcgctgctatcccgctggatgacaagaaaagcttcgacatgctg
caacgctcggagaccacggcggtcttccagcttgaatcccgcggcatgaaagatctgatc
aaacgtctgcagcctgactgcttcgaagatatgatcgcactggtggcgctgttccgtccg
ggtccgctacagtcggggatggtagataactttatcgaccgtaagcatggtcgcgaagag
atttcctacccggacgtgcaatggcagcatgagtgtctgaaaccggtactggagccgacc
tacggcattatcctgtatcaggaacaggtaatgcagattgcccaggagctgtccggatac
acccttggcggcgcagatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggcacctttgaagaaggggcgaaaaaacgcggcgtcgacggcgaactg
gcaatgaaaatctttgacctggtggagaaattcgccggttacggatttaacaaatcgcac
tccgctgcctatgcgctggtctcttaccagacgctgtggctgaaggcgcattaccctgcc
gagtttatggcggcggtaatgacggcggatatggataacaccgagaaagtggtcggtctg
gtagatgaatgctggcgcatggggctcaaaatcctgccgccggacatcaactccgggctt
tatcattttcacgtgaacgatgatggcgagattgtctacggcatcggcgcgataaaaggc
gtgggtgaagggccaattgaagctattattgaggcgcgtaatgaaggcggctacttccgc
gagctgtttgatctctgtgcgcgcacggatatcaaaaaacttaaccgtcgggtgttggaa
aagctaattatgtccggggcgtttgaccgccttggtccgcatcgcgcggcgctgatgaat
tcgctcaacgatgcgctaaaagccgccgatcagcatgcgaaagccgaggctattggccag
gctgatatgtttggcgtgctggcggaagagccggaacaaattgaacagtcttatgccaac
tgtacaccgtggccggagcaggtggtattagaaggagagcgtgaaacgttagggctttac
ctgacgggacaccctatcaaccagtatttaaaagaaattgagcgctatgttggaggccac
aggctgaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtc
attgctgcgcgggtaatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccggacgtctggaagttatgttgtttaccgatgctctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgatggcccgtgaagtcatggatattgacgaggcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcacgtgcgcgattgcgttttggcgcaacgtggcgtgtctctccgagcgat
cgtttgctaaacgatctccgtggccttattggttcggagcaggtggaactggagtttgac
taa
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