Citrobacter arsenatis: E1B03_13855
Help
Entry
E1B03_13855 CDS
T07503
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
cars
Citrobacter arsenatis
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cars03019
]
E1B03_13855 (hrpA)
Enzymes [BR:
cars01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
E1B03_13855 (hrpA)
Messenger RNA biogenesis [BR:
cars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E1B03_13855 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
WHD_HA2
AAA_19
nSTAND3
T2SSE
nSTAND_NTPase5
NACHT
ResIII
PhoH
NTPase_1
SLFN-g3_helicase
AAA_16
DUF6145
Motif
Other DBs
NCBI-ProteinID:
QBM23455
UniProt:
A0A4P6WNV1
LinkDB
All DBs
Position
complement(2665838..2669740)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKLTFNMLQQQLDSLMLRDRQRFARRLHGVKKVKNPDAQQAIYQEMAKEIDHAAGK
VVLREAARPVISYPENLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG
VKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIIEDADDTERDQLQAIFDAVDELGRESQGDILIFMSGE
REIRDTADALNKLDLRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCKLDFLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDTDKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRDNLKLRAEVEELE
HKSRRRDILVDDETLFEFYDQRISHDVVSARHFDSWWKKISRETPDLLNFEKSMLIKEGA
EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQIEESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDW
HWDQVPDHLKITFRVVDDKNKKLQEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW
SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDQLIDANGGPVWTEEGFIALHEK
VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLADIKAQMGGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKLAIDPHRDRAQMLKVDSVQQAWQQWFNKLPPARREDDD
VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQITG
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaattaaccttcaacatgttgcaacaacagcttgactcactgatg
ctgcgtgacagacagcgttttgcccgccgcctgcacggtgttaagaaggttaaaaatcct
gatgcacaacaggccatttaccaggagatggcaaaagagattgatcacgcagcaggtaaa
gttgtgctgcgtgaagcggcgcgtccggttatcagctatccggaaaacctgcccgtcagc
cagaaaaaacaggatattctggaggcgattcgcgaccatcaggtggtgattgtggctggt
gagaccggttcgggtaaaaccacccagttacccaaaatctgtatggaactgggacgtggg
gtaaaagggctgatcggtcatacccaaccgcgtcgtctggcggcgcgtaccgtggcgaat
cgtattgcggaagagctgcaaaccgagccgggcggctgtatcggttataaagttcgtttc
agcgatcatgtcagtgacaacaccatggtcaagctgatgacagacggtattctgctggcg
gaaatccagcaggatcggctgctgatgcagtatgacaccatcatcatcgatgaagcgcac
gaacgcagtctgaacatcgattttctgctcggttatctgaaagaactgctgccgcgtcgt
ccggatctaaaaattattatcacttcggcgactatcgacccggagcgtttttcaaagcat
ttcaataacgcgccgattatcgaagtctccggtcgaacgtatccggtggaagtgcgctat
cgtccgattattgaagatgcagatgataccgagcgtgaccaactgcaggcgatttttgat
gccgtagatgagttaggccgtgagagtcagggcgacattctgatcttcatgagcggcgag
cgcgaaatccgcgataccgccgatgcgctgaataagctggatttgcgccacaccgaagtg
ctgccgctgtatgcgcgtctctctaacagcgagcagaaccgcgtgttccagtcgcacagc
ggtcggcgtatcgtgctggcgactaacgtggcggaaacgtcgctgaccgtacccggcatc
aagtatgtgattgacccgggcactgcgcgtatcagtcgttacagttaccgcaccaaagtc
cagcgcttgccgatcgaaccggtgtcgcaggcctctgctaaccagcgtaaaggccgctgt
ggtcgtgtttcggaagggatctgtattcgtctgtattccgaagacgacttcctgtcgcgc
ccggagtttaccgatccggagatcctgcgtaccaacctggcatccgttattttgcagatg
accgcgttggggctgggcgatatcgcggcgtttccgtttgttgaagcaccggataaacgc
aacattcaggacggtgtgcgcctgctcgaagagctgggagcgataaccaccgacgaacag
gcaaccgcttacaagttaacgccgttgggccgtcagttgtcgcaactgccggtcgatccg
cgtctggcgcgcatggtactggaagcgcaaaaacatggctgtgtgcgtgaggcgatgatc
attacctcggcgctgtctattcaggatccgcgcgagcgtccgatggacaagcagcaggct
tccgacgagaagcatcgccgtttccatgacaaagagtctgattttcttgcatttgtgaac
ctgtggaactatctcggcgagcagcaaaaagcgctgtcgtcaaaccagttccgtcgccag
tgcaaactggatttcctgaactatctgcgcgtgcgtgagtggcaggatatttacacgcaa
ctgcgccaggtagtgaaagagttggggattccggttaacagtgaacctgctgagtatcgg
gaaatccacgttgcgctgctgaccgggttactgtcgcatatcgggatgaaagataccgat
aaacaggagtttaccggggcgcgtaacgctcgcttctcgatcttcccaggctctggtcta
tttaaaaaaccgccgaagtggacgatggtggctgagctggtggaaaccagtcgcctgtgg
ggacgtattgcagcccgcatcgatcctgagtgggtggagccggttgcccaacatctgatc
aaacgttcttacagtgagccgcactgggaacgtgcgcagggcgcggtgatggcgacggaa
aaggtcaccgtctacggcttaccgattgtggcggcccgtaaggtgaactacagccagatt
gatcctgcgctgtcgcgtgaactgttcattcgccatgcgttggtggaaggcgactggcaa
acgcgccatgcgtttttccgtgacaatttgaagctacgggctgaggtggaagagttagag
cacaaatcgcgtcgtcgcgacattttggtcgatgatgagacgctgtttgagttttacgac
cagcgcatcagccatgacgtggtttctgcgcgtcactttgacagctggtggaaaaagatc
agccgcgaaacgccggatctgctcaactttgaaaagagcatgctcatcaaagagggtgcg
gaaaaaatcagtaagctggattacccgaacttctggcatcagggcaatctcaaactgcgc
ctgagctatcagttcgaaccgggagccgatgcggacggtgtgaccgtgcatattccactc
ccgctgcttaatcagatcgaagaaagcggttttgaatggcaaatcccggggctgcgccgc
gaactggtgattgccctgattaagtcgcttccgaaaccggtacgacgcaactttgtgcct
gcgccgaactatgccgaagcgtttttaggtcgcgtcacgccgctggaactgccactgctg
gactcgctggagcgtgaactgcgtcgcatgaccggcgttaccgttgaccgcgaagactgg
cactgggatcaggtgcccgatcacctaaaaatcaccttccgggtagtggatgataaaaac
aagaagctgcaggaagggcgttcgctgcaggatctgaaagatgcgctgaaaggtaaagtt
caggaaacattgtctgcggtggcggatgatggtatcgaacagagcgggttgcacatctgg
agcttcggtcagcttccggaaagttacgagcaaaaacgcggtaactataaggtcaaagcg
tggccagcgttggtggatgagcgtgacagcgttgctatcaaactgtttgataacccgctg
gagcaacagcaggcgatgtggtgtggtttacgccgtctgttgttgctgaatattccatcc
ccgatcaaatatttgcatgagaaactgcccaacaaagccaagctgggattgtattttaac
ccgtacggtaaagttctggatttgattgacgactgtatctcctgcggtgtggatcagtta
attgacgccaacggcggtccggtgtggaccgaagaaggctttatcgcgctgcatgagaaa
gtgcgggctgaactgaacgatacggtggtggatattgcgaagcaggtcgagcagatcctg
accgcggtatttaatatcaacaaacgtctgaaagggcgcgtggatatgaccatggcgctg
gggcttgcagacatcaaagcgcagatgggcgggctggtgtaccgtggttttgttaccggc
aatggtttcaaacgtttgggcgatacgttgcgctatttgcaggctatcgaaaaacgtctg
gaaaaactggctatcgacccgcatcgtgaccgtgcgcagatgttgaaagtggatagcgtg
cagcaggcctggcagcagtggttcaataagctgccgcccgcgcgccgggaagatgacgat
gtcaaagagattcgctggatgatagaagagctgcgcgtcagctattttgcccagcagctt
ggtacaccgtatccaatctccgataaacgtattctgcaagcaatggagcagattacaggg
taa
DBGET
integrated database retrieval system
