Citrobacter arsenatis: E1B03_16855
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Entry
E1B03_16855 CDS
T07503
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
cars
Citrobacter arsenatis
Pathway
cars03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E1B03_16855 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cars03400
]
E1B03_16855 (sbcB)
Enzymes [BR:
cars01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
E1B03_16855 (sbcB)
DNA repair and recombination proteins [BR:
cars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E1B03_16855 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E1B03_16855 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E1B03_16855 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBM24007
UniProt:
A0A4P6WM69
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All DBs
Position
3231493..3232917
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AA seq
474 aa
AA seq
DB search
MNDGKQQPGFLFHDYETFGTHPALDRPAQFAAIRTDSDFNIIGEPEVFYCKPADDYLPQP
EAVLITGITPQEAREKGENEAAFAARIHALFTVPKTCILGYNNVRFDDEVTRNILYRNFY
DPYAWSWQNDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHANAH
DAMADVYATIAMAQLVKTRQPRLFDYLYSHRNKHKLAALIDVPQMKPLVHVSGMLGAWRG
NTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDALRERLYTAKADLGDNPAVPVKLV
HINKCPVLAQANTLRPEDAYRLGINRQHCLDNLKVLRENPQVRDKVVAIFADAEPFASSD
NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDISFVDKRIEKLLFNYRARNFPGTLDE
AEQQRWLDHRRQVFTPEFLQDYANELQMLSQQYADNKEKLMLLKSLWQYAQEIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacggcaagcagcaacctggttttctctttcacgattacgagacctttggtacc
catccggcactggacagacccgcgcaatttgcggctatccgcacagatagcgatttcaac
atcatcggtgaacctgaggtcttttactgtaaacccgcagacgactatctgccgcagcct
gaggcggtgctgataaccggaatcaccccgcaggaagcacgtgaaaagggagagaatgaa
gctgcatttgctgcacgcatccacgccctgttcaccgtgccgaaaacctgtatcctgggc
tataacaacgtgcgcttcgacgatgaggtgacgcgcaacatcctgtaccgtaatttctac
gatccctacgcctggagctggcagaacgataattcacgctgggatttactggatgtgatg
cgcgcctgctatgccctgcgtcctgaaggcattaactggccggaaaacgacgacggctta
cccagctttcgcctggagcatttgaccaaagccaacggtattgaacacgccaatgcccac
gatgcgatggccgacgtgtatgccacaatcgcgatggcgcaattagtaaaaacacgccag
ccgcgtctgtttgattatctctacagccatcgtaataaacacaagctggccgcactgatt
gatgtcccgcaaatgaaaccgctggttcatgtctctggcatgttaggcgcatggcgcggt
aataccagttgggtggcaccgctcgcctggcacccggagaatcgcaacgcggtcattatg
gtcgacctggccggtgatatttcgccgctgctcgaactcgacagcgacgcgctacgtgag
cggctctacaccgctaaggccgatctgggagataacccggcggtaccggttaaactggtg
cacatcaacaaatgcccggtcctggcacaggcgaacactctgcgcccggaagatgcgtat
cgccttggtattaaccgccagcattgcctggataatcttaaagttctgcgcgaaaacccg
caggtacgcgacaaggtcgtggctatcttcgccgatgcagaaccctttgcgtcatccgat
aacgtagacgcccagctgtacaacggctttttcagcgatgccgaccgggccgcgatgaaa
atcgtcctggagaccgaaccgcgcaatttaccagcgctggatatctcctttgtcgataaa
cgcattgaaaaactgctgtttaactaccgcgcgcgtaacttccccggaacgctggatgaa
gccgaacaacaacgctggctggaccatcgtcgtcaggtattcacgccggagtttttgcaa
gattacgccaatgaactacagatgctgagtcagcaatatgcggacaacaaagagaagctg
atgctgctgaaatcactctggcagtatgcgcaagagattgtataa
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