Citrobacter arsenatis: E1B03_21210
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Entry
E1B03_21210 CDS
T07503
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cars
Citrobacter arsenatis
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cars03009
]
E1B03_21210 (rlmD)
Enzymes [BR:
cars01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
E1B03_21210 (rlmD)
Ribosome biogenesis [BR:
cars03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E1B03_21210 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_11
MTS
Cons_hypoth95
Methyltransf_ANTKMT
Methyltransf_23
FtsJ
Methyltransf_4
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_15
TPMT
PrmA
CMAS
Motif
Other DBs
NCBI-ProteinID:
QBM24815
UniProt:
A0A4P6WSF8
LinkDB
All DBs
Position
complement(4200641..4201939)
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AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHNGKALFIPELLPQESAEVVITEDKKQ
FARAQVKRRLNDNPQREVPRCPHFGVCGGCQQQHASISLQQRSKSAALSRLMKCEVSDVI
ADTPWGYRRRARLSLNYRPKEQKLQMGFRKSGSSDIIDVKQCPILVPQLEALLPHIRACL
ESLQGLRHLGHVELVQAGSGTLMILRHMAPLSAADKEKLECFSHSQGLSLFLAPQSEILE
SLSEESPWYDSNGLRLTFSPRDFIQVNEGVNQQMVARALEWLDVQPEDRVLDLFCGMGNF
TLPLATRAASVVGVEGVPALVEKGRENALNNGLHNVTFFHENLEEDVTRQPWAKNGFDKV
LLDPARAGAAGVMQHIIKLEPIRVVYVSCNPATLARDSDALLNAGYAIRRLAMLDMFPHT
GHLESMVLFERM
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacgacgcgtgacgacgcgtcagatcataaccgttacc
gtcaatgacctcgatccttttggtcagggtgtcgctcgccataacggaaaggcgttgttt
ataccggaattgttaccccaggaaagcgccgaggtggtgattaccgaagataaaaaacag
ttcgcccgcgcgcaagtaaaacgacgtttaaacgacaatccacagcgtgaagtgccgcgt
tgcccgcattttggcgtgtgcggcggttgccagcagcagcatgccagcatctcgttacag
cagcgcagtaaaagcgctgcattgtcgcgtttaatgaaatgtgaagtatcggatgttatc
gctgatacgccgtggggctatcgtcggcgcgcacgtttgagcctgaactatcggccaaaa
gaacaaaaattgcagatggggtttcgcaaatccggttccagcgacattatcgatgtcaaa
caatgccctattttggtgccccagcttgaagcgctattgccccacatcagggcgtgtctg
gaaagtctgcaagggttacgccatcttggtcatgtcgagctggtgcaggcggggagcgga
accctgatgattttgcgccacatggcgccattaagtgcggcggataaagaaaaactggaa
tgcttttcgcattctcaagggctgtctttgtttctggccccgcaaagcgagatactggaa
tcattatcagaagaatcgccctggtatgactcaaatggactacggttaaccttcagccca
cgtgattttatccaggtcaacgaaggggtaaaccaacaaatggttgctcgtgcgctggaa
tggctcgatgtacaacctgaagatcgcgtactcgatctgttctgtggaatgggaaatttt
accctgccgctggcaactcgggcggcgagtgtcgtgggagtggaaggggtgccggcgttg
gtggaaaaaggccgtgaaaacgcgctgaataacggattacacaatgtgacattctttcat
gaaaaccttgaggaagatgtcacccggcagccgtgggcgaaaaacggatttgacaaagta
ttgctcgatcctgcgcgtgcgggggctgcaggtgtaatgcaacatattataaaattagaa
cctatacgcgttgtttatgtatcctgtaatccggcaacgctggctcgtgacagcgacgct
ttgctcaatgcgggatatgccatacggcgactggcgatgcttgatatgttcccgcacact
ggacacctggaatcaatggtcctgtttgagcgtatgtaa
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