Citrobacter arsenatis: E1B03_21420
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Entry
E1B03_21420 CDS
T07503
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cars
Citrobacter arsenatis
Pathway
cars03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E1B03_21420 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cars03400
]
E1B03_21420 (recB)
Enzymes [BR:
cars01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E1B03_21420 (recB)
DNA repair and recombination proteins [BR:
cars03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E1B03_21420 (recB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QBM24853
UniProt:
A0A4P6WRF3
LinkDB
All DBs
Position
complement(4245528..4249073)
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AA seq
1181 aa
AA seq
DB search
MNDAAESLDPLRLSLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRETTDNPLYARLLDEIADKRQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVIFETWKGPQALLRDIDRYLQGEAPVIKAPPSDDETLASRHEQILARINQIKQQWCDSV
DELDGLLEASGIDRRKFNRGNQGKWIEKISAWAQEETQSYQLPDALEKFSQRFLEERTKA
GGTTPQHPLFVAIDELLSEPLTLRDLVITRALAEIRTAVAEEKRRRGELGFDDMLSRLDA
ALRSESGDALATAIRTRFPVAMIDEFQDTDPQQYRIFRRIWQHQPETALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNTLFSQMDDAFMFREIPFSPVKS
AEKNQALQFVLHGETQPAMSMWLMEGESCGVGDYQNYMAQVCATQIRDWLKAGHSGAAQL
VSGKTSSPVRASDISVLVRSRQEAALVRDALTQLAIPSVYLSNRDSVFETLEAQELLWVL
QAVMTPERENTLRSALATSMMGLNAQDLEALNNDENAWDAVVEEFDGYRQIWHKRGVMPM
LRALMAARQIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLSQHILEPDS
NASSQQLRLESDKHLVKIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRSSFEAVLDL
SDAEESVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRSDKKGDTDVHQSALGR
LLQKGEPMDAAGLRGALEALCSDDIACQTPVPPDGEPWQVAQAVSGELSAKLLRRTPGDS
WRVTSYSGLQQRGHGIAQDLIPRLDIDAAGVGDAIEESGLTPHQFPRGASPGTFLHSLFE
DLDFTQPVDPHWVEEKLALGGYEAHWSPVLTEWLDAILQAPLNETGVSLSQLSAREKQVE
MEFYLPISQPLMANQLDALIRQYDPLSAGCAALEFMQVRGMLKGFIDLVFRHQGRYYLLD
YKSNWLGEDSSAYTQQAMASAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGGVIY
LFLRGVDRENPQQGIYATRPDGELIALMDEMFAGAPLEEMS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgccgctgagtcccttgatccactgcgcttgtccctgacgggcgagcgcctg
attgaagcctctgcgggcaccggtaaaacctttaccatcgccgccctgtatttacgttta
ttgcttggactgggcggctctgccgcctttcctcgtcctctgaccgtcgaagagctgtta
gtggtcaccttcaccgaggcggccactgaagagctgcgcggtcgaattcgtagcaacatt
catgaactgcgaattgcctgcctgcgtgaaaccaccgacaacccgctatacgcccgtttg
ttagacgaaatcgccgataaaagacaggccgctcagtggctgttattggctgaaagacag
atggatgaagcggcggtgtttaccatccacggtttttgtcaacgtatgctcagtcttaac
gcctttgagtctggcatgctgttcgaacagcaactgatagaagatgaatcgctgctgcgc
tatcaggcctgcgcggacttctggcgtcggcactgctatccgctaccccgcgacattgcg
caggtgatttttgaaacgtggaaaggaccgcaggcgctgctgagagatatcgatcgctat
ctgcagggggaagcaccggttatcaaggctccgccgtccgatgacgaaacgctggcctcc
cggcacgaacaaattctcgcgcgcattaatcaaatcaagcagcagtggtgtgattccgtt
gatgagctggacggcttgctggaagcgtccgggatcgaccggcgtaaatttaatcgcggt
aaccagggcaagtggatcgaaaagatcagcgcgtgggcacaggaagaaacccaaagttat
cagcttcctgacgcactggaaaaattctcacagcgttttctggaagagcgcaccaaagcg
ggcgggacaacccctcagcacccgctgtttgtcgctattgatgaactgcttagcgaaccg
ttaactctgcgcgatctggtgatcacccgggcgttggcggagatccgcacggcggttgcc
gaagagaaacgacgccgcggtgagctgggctttgacgatatgctcagccgtctggatgcg
gcgctgcgcagtgaaagcggcgatgcgctggcgacggctattcgtactcgttttccggtc
gcaatgatcgatgaattccaggataccgatccgcaacagtaccgcatatttcgccggatc
tggcagcatcagccggagaccgcgctgttgttgattggcgatcccaaacaggctatttat
gcgtttcgcggcgcggatatcttcacctatatgaaggcgcgcagcgaagtcagcgcacac
tatacgctcgataccaactggcgttcggcccccggcatggtcaatagcgtgaatacgctt
ttcagccagatggacgacgcctttatgttccgcgaaatcccctttagcccggtaaaatct
gcagaaaaaaatcaggcgcttcagtttgttttacatggtgaaacacagccagctatgagc
atgtggctgatggaaggggaaagctgtggcgtaggcgactatcagaactacatggcccag
gtgtgcgccacgcaaattcgcgactggcttaaggccgggcattctggcgctgcgcaactg
gtcagcggtaaaacatccagtccggtacgcgcgtcggacatcagtgtattggttcgtagc
cgccaggaagcagcgctggtccgtgatgcgcttacgcaactggccattccctcagtctac
ctctccaaccgcgacagcgtatttgaaacgctggaggcgcaggagttgctgtgggtgctg
caggcggtgatgacgccggagcgtgagaacacgctgcgtagtgcgctggcgacctcaatg
atggggctgaatgcgcaggatcttgaagcgttaaataacgacgaaaatgcctgggatgcg
gtggtcgaagagttcgatggctatcgtcagatctggcataaacgcggcgtgatgccaatg
ctgcgcgcgctgatggccgcccgccagattgcggaaaacctgctggcaacggcagggggc
gaacgccgtctgaccgatattttacatattagcgaactgttgcaggaagccggctcgcag
ctggaaagcgagcatgcgctggtacgctggctgtcccagcatattcttgaacccgacagc
aacgcgtcgagccagcagctcaggctggaaagcgacaagcatctggtcaaaatcgtcacc
atccataaatcgaaagggctggaatatccgctggtctggctgccgtttatcaccaatttc
cgcgtccaggatcaggctttctaccacgatcgcagctcctttgaagcggtgctggatctc
agcgatgccgaggagagcgttgagctggccgaagcggaacgcctggcggaagatctgcgt
ttgctttatgtcgcgctaactcgttcggtatggcactgcagccttggtgttgcgccgtta
gtgcgccgtcggagcgataaaaaaggggataccgatgtgcatcagagcgcgcttggtcga
ctgttgcaaaaaggtgagccgatggatgccgcgggtctgcgtggtgcgcttgaagcgctg
tgcagcgacgatattgcctgccagacgccagtgccgcctgacggtgaaccctggcaggtt
gcacaggctgttagcggtgaactgagtgcgaaattactgcggcgtacgcccggcgatagc
tggcgcgtgaccagctattccggtctgcaacagcgtgggcatggtatcgcgcaggatctg
atcccgcgactggatatcgatgccgcaggcgtcggagatgctattgaagagtcgggactt
acgccgcatcagttcccgcgcggcgcttcgccgggcacattcttgcatagcttgtttgaa
gatctcgattttactcaaccggtcgatccgcattgggtcgaggaaaaactggcgttaggc
ggttatgaggcacactggtcgccggtgttgaccgaatggctggacgccattttgcaggca
cctctcaacgagacgggcgtgagtttgagccagctttccgcgcgtgaaaaacaggtggag
atggagttttatttaccgatttcgcagccgctaatggccaaccaacttgatgcgttaatt
cgtcaatacgatccgctctcggcggggtgcgctgcgctggaatttatgcaggtgcgcggc
atgctgaaaggctttattgacctggtattccgccaccaggggcgttattacctgctcgat
tacaaatcgaactggctgggcgaagacagctcagcctatacgcagcaggcgatggcctct
gccatgcaggcgcatcgttacgacctacagtatcaactttatactctggcgctgcatcgc
tacttgcgccatcgcattgctgattacgattatgaacgccattttggcggtgttatttat
ctcttcctgcgtggcgttgaccgtgagaatccgcagcagggaatttacgcgacccgacct
gacggggagttgatcgccctgatggacgaaatgtttgccggtgcgccactggaggagatg
tcatga
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