Citrobacter arsenatis: E1B03_21720
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Entry
E1B03_21720 CDS
T07503
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cars
Citrobacter arsenatis
Pathway
cars03410
Base excision repair
cars03430
Mismatch repair
cars03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E1B03_21720 (recJ)
03430 Mismatch repair
E1B03_21720 (recJ)
03440 Homologous recombination
E1B03_21720 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cars03400
]
E1B03_21720 (recJ)
DNA repair and recombination proteins [BR:
cars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
E1B03_21720 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E1B03_21720 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E1B03_21720 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QBM24908
UniProt:
A0A4P6WV21
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All DBs
Position
complement(4314950..4316683)
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AA seq
577 aa
AA seq
DB search
MKQQIQLRRREADETVELPADLPPLLRRLYASRGVRSAQELERSVKGMLPWQHLNGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSILAMRALGCSNVDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVEHARALGIPVVVTDHHLPGDTLPGAEAIINPNLH
DCEFPSKSLAGVGVAFYLMLALRTFLRDKGWFDERGIAPPNLADLLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEISNRDPLKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSSDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMILKFGGHAMAAGLSLEEAQFERFQQRFGELVTEWLDPALLQGEVVSDGPLSAVEMTME
VAQMLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTT
CWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaacttcgtcggcgtgaagccgacgagaccgtcgagctacctgct
gatttgccgccattgctgcggcgtttatacgccagtcgcggcgtgcgcagtgcgcaggag
cttgaacgtagcgtcaaaggaatgctgccatggcagcatttgaatggcgtcgaaaaagcg
gttgagatcctctataacgcctttcgcgaaggtacccgaatcatcgtggtcggcgatttt
gacgccgatggcgcgaccagtacggcgctgagcatcctggcgatgcgcgcgttgggctgc
agtaacgttgactacctggtgcctaatcgttttgaagacggctacggcttaagcccggaa
gtggtggatcaggctcatgcccgtggcgctcagctgattgtcaccgtagataacggcatc
tcgtcccacgcgggtgttgaacatgccagagcgttggggatcccggtcgttgtgaccgat
caccatttgcctggggacacgctgccgggcgctgaagcgatcatcaatcctaacctgcac
gattgtgaattcccgtctaaatcgctggcaggcgttggcgtggccttctatctgatgctg
gcgctgcgcaccttcctgcgtgataaaggctggtttgatgaacgaggcattgcgccgccg
aacctggcggatttgctcgatctggtcgcgcttggcacggtggccgatgtggtcccactg
gatgccaataaccgcattctgacgtggcaaggcttaagccgcattcgtgccggaaagtgt
cgccctggtatcaaagcgctgctggagatttccaatcgcgacccacttaaactggctgcc
agcgatttaggttttgccctcgggccacggctgaatgcggcggggcgcctggacgatatg
tccgttggcgtggcgctgttgttgtgcgacaacattggtgaagcgcgtgtgctggccaat
gagttggacgcgctcaaccagacgcgcaaagagatcgagcagggtatgcaggccgaagcg
ctgaccctgtgtgaaaagctggaacgcagtagcgatacgctaccgggtggcctggcgatg
taccatcccgagtggcatcagggggtggtggggattctggcatcgcgtattaaagagcgc
ttccaccgtccggtgattgcgtttgccccggctggtgacggtacgctcaaaggctccgga
cgttctattcagggactgcacatgcgcgatgcgctggagcgcctggacaccctttatcct
ggcatgatcctcaaatttggtggtcacgccatggcggcggggttgtcgctggaggaggcg
cagtttgagcgtttccagcagcgttttggcgaactggtaaccgagtggctggatcccgct
ttactgcaaggcgaagtagtgtcagacggacctttgagcgcggtggagatgaccatggaa
gtcgcgcaaatgctgcgtgatgctgggccgtggggacaaatgttcccggaaccgctgttt
gacgggcatttccgtttgcttcagcagcgtctggtcggtgagcgtcatctgaaggtgatg
gtcgagcccgttggcggcggtccactgctggacggtattgcatttaatgtcgataccacc
tgctggccggacaacggtgttcgtgaagttcagcttgcttacaaactggatattaacgag
tttcgcggcaaccgcagcttgcagattataatcgacaatatctggccagtctga
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