Citrobacter arsenatis: E1B03_23295
Help
Entry
E1B03_23295 CDS
T07503
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cars
Citrobacter arsenatis
Pathway
cars03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B03_23295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cars03019
]
E1B03_23295
03009 Ribosome biogenesis [BR:
cars03009
]
E1B03_23295
Enzymes [BR:
cars01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E1B03_23295
Messenger RNA biogenesis [BR:
cars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E1B03_23295
Ribosome biogenesis [BR:
cars03009
]
Prokaryotic type
rRNA helicases
E1B03_23295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
DeaD_C
ResIII
CMS1
AAA_22
DRTGG
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QBM25202
UniProt:
A0A4P6WT72
LinkDB
All DBs
Position
complement(4639168..4641096)
Genome browser
AA seq
642 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKMQPEEELDIET
LAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRGPRDRNDRGPRDRNDRGGEDRPRRE
RRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPG
DVLQHFTRTRILNKPMNMQLVGDAVPHTGGERRGGGRFSGERREGGRGEGRGFSGERREG
GRGDGRRFSGERREGNRGPRRDDSSAPRRDDSAGRRRFGGDA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccaatccaggcagagtgcattccgcatctg
ctgggcggccgcgatgttctgggtatggcccagacgggtagcggcaaaactgcagcgttc
tctttaccgctgctcaacaatcttgatcctgagctgaaggcacctcagattctggtgctg
gcaccgacccgcgaactggcggttcaggtagcagaagccatgacggatttctctaaacac
atgcgcggcgtgaacgtggttgccctgtacggcggccagcgttatgacgtgcaattacgt
gccctgcgtcagggaccacagatcgtcgtcggtacaccgggccgtctgctggatcacctg
aaacgcggtactctggacctctccaaactgagcggtctggtactggacgaagctgacgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgcgactatgccggaagcgattcgtcgtattacccgccgc
tttatgaaagagccgcaggaagtacgcattcagtccagcgtcactacccgtcctgacatc
agccagagctactggactgtttggggcatgcgtaaaaatgaagcgctggtgcgtttcctg
gaagcggaagactttgatgcggcgattatcttcgttcgtaccaaaaatgcgaccctggaa
gtggcagaagcgctggagcgtagcggttatagcagcgctgcactgaacggcgacatgaac
cagtccctgcgtgagcagacactggagcgtctgaaagacggccgcctggatatcctgatt
gctaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggttgttaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgcgggtcgtgcgttgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgaccattccggaagtagaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgccgccaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgctctgctggcgaaaatgcagccggaagaagaactggatatcgaaacg
ctggcagctgcactgctgaaaatggcgcagggcgaacgtccgctgatcctgccgccagat
gcgccgatgcgtccgaaacgcgaattccgtgaccgtgacgatcgtggtccgcgtgaccgc
aacgatcgtggcccgcgtgaccgtaatgaccgtggtggtgaagaccgtccgcgtcgtgaa
cgtcgtgacgttggcgatatgcagctgtaccgcattgaagtgggtcgtgatgacggcgtt
gaagttcgtcatatcgttggtgcgattgctaacgaaggcgatatcagcagccgttacatc
ggtaacatcaagctgtttgcttcccactctaccatcgagctgccgaagggtatgccgggc
gacgtgctgcagcactttacccgtactcgcatcctgaacaagccgatgaacatgcagctg
gttggcgatgcagttccgcacaccggtggtgagcgtcgtggcggtggtcgtttcagcggt
gagcgtcgtgaaggcggtcgtggtgaaggtcgtggctttagcggcgaacgtcgtgaaggc
ggtcgtggcgatggtcgtcgtttcagcggcgaacgtcgtgaaggcaaccgtggcccgcgt
cgtgacgattcttctgctccgcgtcgtgatgactctgctggtcgtcgtcgtttcggcggt
gacgcataa
DBGET
integrated database retrieval system
