Citrobacter arsenatis: E1B03_23310
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Entry
E1B03_23310 CDS
T07503
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cars
Citrobacter arsenatis
Pathway
cars03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B03_23310 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cars03019
]
E1B03_23310 (pnp)
03016 Transfer RNA biogenesis [BR:
cars03016
]
E1B03_23310 (pnp)
Enzymes [BR:
cars01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E1B03_23310 (pnp)
Messenger RNA biogenesis [BR:
cars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E1B03_23310 (pnp)
Transfer RNA biogenesis [BR:
cars03016
]
Prokaryotic type
tRNA degradation factors
E1B03_23310 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
QBM25204
UniProt:
A0A4P6WPM9
LinkDB
All DBs
Position
complement(4642270..4644402)
Genome browser
AA seq
710 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALTLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQAINELAKEAGKPRWDWQPEAVNE
ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIAALVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTTR
DAQNLDELMGERTDNFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPELDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAGEPEAPASQGE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaacc
ggcatgatggcgcgtcaggcgactgccgctgttatggttagcatggatgacaccgcggta
ttcgttaccgttgttggccagaaaaaagcgaaaccaggccaggactttttcccgctgacc
gttaactatcaggagcgtacctacgctgctggccgtatcccgggtagcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggtttcgttaacgaagttcaggttatcgcgaccgttgtttccgtt
aacccacaggttaacccggacatcgtggcaatgattggtgcatctgctgcgctgactctg
tctggtatcccattcaacggcccgatcggtgctgcacgtgttggttacatcaatgaccag
tacgtactgaacccgactcaggacgaactgaaagaaagcaagctggacctggttgttgcc
ggtactgaagccgccgtactgatggttgaatccgaagctgaactgctgagcgaagaccag
atgctgggcgcagtagtatttggtcacgaacagcagcaggttgttattcaggctatcaac
gagctggcaaaagaagctggcaaaccgcgttgggattggcagccagaagccgtcaacgaa
gcgctgaacgcacgcgttgccgcactggcagaagctcgtctgagcgatgcttaccgtatc
actgacaaacaagagcgttatgctcaggttgacgtgatcaaatctgaaaccatcgcggct
ctggtggctgaagacgaaaccctggacgctaacgaactgggtgaaatcctgcacgctatc
gagaaaaatgttgttcgtagccgcgtactggcaggcgagccgcgcatcgatggccgtgaa
aaagacatgatccgtggcctggacgtgcgtactggcgttctgccgcgtacccacggttcc
gcactgttcacccgtggcgaaactcaggcgctggttactgcgaccctgggcaccacgcgt
gatgcacagaacctcgacgaactgatgggcgagcgtactgacaacttcctgttccactac
aacttccctccgtactgcgtaggcgaaaccggtatggtcggttctccgaagcgtcgtgag
attggtcacggtcgtctggcgaagcgtggcgtactggcagtaatgcctgaactggataaa
ttcccgtacaccgtgcgtgtggtttctgaaatcaccgaatctaacggttcttcttcaatg
gcttccgtatgtggtgcttccctggcgctgatggacgcaggtgtgccgatcaaagccgcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactttgttgttctgtctgac
atcctgggcgacgaagaccacctgggcgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgcactgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcacatcctgggtgtgatggaacaagcg
atcaacgcaccgcgtggcgacatttctcagttcgctccgcgtatccataccatcaagatc
agcccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgctctgacc
gaagaaaccggcaccaccattgaaatcgaagatgatggtaccgtgaagattgctgcgacc
gacggtgagaaagcgaaatatgctatccgtcgtatcgaagagatcaccgcagagatcgaa
gtaggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
attggtggcggtaaagaaggtctggtacacatttctcagatcgctgacaagcgcgttgag
aaagtgaccgactacctgcagatgggccaggaagtaccggtcaaagttctggaagttgat
cgccagggccgtgtacgtctgagcattaaagaagcaactgagcagtctcagcctgcaggc
gaaccggaagctccggcaagccagggcgagtaa
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