Cryobacterium arcticum: PA27867_1049
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Entry
PA27867_1049 CDS
T04435
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cart
Cryobacterium arcticum
Pathway
cart03420
Nucleotide excision repair
cart03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PA27867_1049
03430 Mismatch repair
PA27867_1049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cart03400
]
PA27867_1049
Enzymes [BR:
cart01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PA27867_1049
DNA repair and recombination proteins [BR:
cart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PA27867_1049
MMR (mismatch excision repair)
Other MMR factors
PA27867_1049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ANP72016
UniProt:
A0A1B1BHN4
LinkDB
All DBs
Position
1:1193899..1197363
Genome browser
AA seq
1154 aa
AA seq
DB search
MNPPDMNTGGANADDTFTATIQTRSVSALAIAEALGMFPPTSEQQAVIEAPLSPTLVVAG
AGSGKTETMANRVLWLLANGHARPDQILGLTFTRKAAGELAERINGRIRQLSEAGLMPAG
DGTADPVTGLTAGPDSADLFNAPAVSTYNSFASRLFTDNALLLGREPESVLLSETSAWLL
ARRVVVAHGDGRLVKYGKGVDAVTDAVLSLSRALAENPPPYVPGEEPEPHDLARLANSFG
YLADLPYGNPRKKKPYDSVLEAIAAVAPLPVLAELADAYGAEKRRQGLIEFSDQVALALQ
VCRKVPAVVARYREQYRIVLLDEYQDTSVLQTELLRTLFAHHPVMAVGDPHQSIYGWRGA
SSANLLGFSTDFAELANTEAPSMSLSYTWRNPVTVLDAANALVAPLSAQLRARPNGIQVE
TLKVPAGKAAGRVEAAMHETIADEAAAIARWFAARLGSETSPADPDAEPRSGAMLFRARR
DMEFYAEVLREHGVPAHVLGLGGLLSTPEVADVLAVLRVVHDPSAGSDLIRLLTGGRWRI
GVRDLQALSDVAGWLATHDWAQKAVSDELKAKLRASVATEESRSLVDALDFVAGVPETHG
QLAAFSDEGRLRLRQAGRQLAWLRSRAGLGLLDFVRLIEQETLLDLELVANESHGRALAN
LYAFHDAVSAFLDSDEQGTLASFLRWLARAERQDDLGPRGEAAEPGTVQLLTIHGSKGLE
WDFVAIPGMTEKNLPAPSREVSGWLRFGELPYPCRGDRAELPELRRLGHETQLSFDIDFE
LYKHELADRHDAEERRLIYVATTRSQQQLLLTGAFWGGGTTVRKPSRYLLELAEAGLIPE
LPEGSEHDEKPLTDEDTSEVWPFDPLGTRRPVVEAAATLVRAQGGDIGDGDGEDGRDPDE
PDTPWSREVTLLLEERALRLAGPVALDVPTRIPASRFKDYVDDPAAVLARLRRPMPERPY
RATRLGTLFHSWVEQRSAGGSSGDLLDASMDELDLDLEADEESAVDSGTGMPVELDQLEQ
FKATFERSPWANLAPEEVEIEIHHVLGEQVFICKLDAVYKTETGYQVVDWKTGKAPKDAA
DLELKQTQLALYRLAYATWKGIDPAIVDAVFYFVADDTVVAPERLYSEEDLVRAWSSVAG
ASAAVEIGPVASSV
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccccagacatgaacaccggcggcgcgaacgccgacgacacgttcaccgcgaca
attcagaccagatcggtctccgccctggccatcgccgaggcgctgggcatgttcccgccc
accagcgaacagcaggccgtgatcgaggcgccgctcagccccaccctcgtggtggccggc
gccggaagcggcaagaccgagaccatggccaaccgggtgctctggctgctggccaacggt
catgcccggcccgaccagatcctcggcctcaccttcacccgcaaggccgccggcgagctg
gccgaacgcatcaacggccgcatccggcagctcagtgaggccgggctgatgcccgccggc
gacggcacggcagaccccgtcaccggcctcaccgcagggcccgactccgccgacctgttc
aacgcgccggcagtgtccacctacaactccttcgccagccgactgttcaccgacaacgcg
ctgctgctcggccgcgaacccgagtcggtgctgctcagcgagaccagcgcctggctgctc
gcccgccgggtggtcgtggcccacggtgacggccgcctggtgaaatacggcaagggcgtc
gacgccgtgacggatgccgtgctctcgctcagccgggcgctggccgagaatccgccgccg
tacgtgcccggcgaggagcccgaaccgcacgacctggcccgcctggcgaacagcttcggc
tacctcgccgacctgccctacggcaacccgcgcaagaagaagccgtacgactcggtgctc
gaggccatcgccgccgtggctccgctgcccgtgctggccgagctcgcggatgcctacggg
gccgagaaacgccgccagggactgatcgaattctccgaccaggtggcgttggcgttgcag
gtctgccgcaaggtgccggccgtggtggcccgctaccgcgagcagtaccgtatcgttctg
ctcgacgaataccaggacacctcggtgctgcagaccgagctgctgcgcaccctcttcgcg
caccacccggtgatggccgtcggcgacccgcaccagtccatctacggatggcgcggagcc
agttcggccaacctgctcggcttctccaccgacttcgccgagctggccaacaccgaggca
ccctcgatgtcgctctcctacacctggcgcaacccggtgactgtactcgacgccgccaac
gcccttgtcgcgccgctcagcgctcagctgcgcgcccggcccaacggcatccaggtggag
accctcaaggtccccgccggcaaggcagccggccgggtggaggccgcgatgcacgagacc
atcgccgacgaggctgccgccatcgcgcgctggttcgccgcgcggctgggcagcgagacc
tcgcccgccgaccccgacgcagagccccgctcgggggcgatgcttttccgcgcccgccgc
gacatggagttctacgccgaggtgctgcgggaacacggcgttcccgcgcacgtgctgggc
ctcggcggcctgctctccacaccggaggtggccgatgtgctcgccgtgctccgggtggtg
cacgacccgtccgccggcagcgacctgatccggctgctcacgggcggccggtggcgcatc
ggggtgcgcgacctgcaggccttgtcggacgtggccggttggctcgccacgcacgactgg
gcgcagaaggccgtgtcggacgagctcaaggccaagctgcgcgcatccgtcgccaccgaa
gagagccgctcgctcgtggacgccctcgacttcgtcgccggtgtgccggagacccacggc
cagctggccgcgttcagcgacgagggacgcctacggctccgccaggccggccggcagttg
gcctggctgcgcagccgcgcgggacttggcctgctcgacttcgtgcgcctgatcgagcag
gagaccctgctcgacctcgaactggtcgccaacgagagccacggcagggccctggccaac
ctctacgccttccacgacgccgtgtcggcgttcctcgacagcgacgagcagggcaccctg
gccagcttcctgcgctggctggcccgggccgaacgccaggacgacctcggcccgcgcggt
gaggcggccgaacccggcaccgtgcagctgctcaccatccacgggtccaaggggctcgag
tgggacttcgtggccatcccgggcatgaccgagaagaacctgccggcgccgagccgggag
gtgtcgggctggctgcggttcggcgagctgccctatccctgccggggagaccgggccgag
ctgccggagctgcgccggctgggccacgagacccagctctccttcgacatcgacttcgag
ctgtacaagcacgagctcgccgaccggcacgacgccgaggagcggcggctgatctacgtg
gccaccacccggtcccagcagcagttgctgctcaccggagcgttctggggtggcggcacc
accgtgcgaaagcccagccggtacctgctcgaactggccgaggccgggctcatccccgag
ttgccggagggcagcgagcacgacgagaagcccctgaccgacgaggacaccagtgaggtc
tggccgttcgacccgctcggcacccggcgcccggtcgtggaggccgccgccacgctcgtg
cgcgcccagggcggcgacatcggggacggcgacggcgaggacggcagggacccggacgag
ccggacacgccctggtcgcgggaagtgacgctgctgctcgaggagcgcgcgctgcgcctt
gccggccccgtcgcactcgacgtgcccacccgcatcccggcctcccggttcaaggactac
gtcgacgacccggcggccgttctggcccggctccggcgcccgatgcccgagcggccctac
cgggccacccggctgggcaccctgttccactcctgggtcgaacaacgctccgccggcggg
tcctccggggatctcctcgatgcgagcatggacgagctcgacctcgatctcgaggccgac
gaggagtccgccgtcgattcagggacgggcatgcccgtcgaactggaccagctggagcag
ttcaaggccaccttcgaacgctcaccctgggccaacctggcgccggaagaggtggagatc
gagatccaccacgtgctgggggagcaggtcttcatctgcaagctcgacgcggtgtacaag
accgagaccggctaccaggtggtggactggaagaccggcaaggcgcccaaggacgccgcc
gacctcgagctcaagcagacccagctggcgctgtaccggctggcctacgccacctggaag
ggtatcgacccggccatcgtcgacgcggtgttctacttcgtcgccgacgacactgtcgtc
gcccctgagcggctctactccgaggaagacctcgtgcgggcctggtcgtcggtggccggc
gcatccgccgccgtggagatcgggccggtggcgtcgtcggtgtag
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