Cryobacterium arcticum: PA27867_1052
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Entry
PA27867_1052 CDS
T04435
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cart
Cryobacterium arcticum
Pathway
cart03420
Nucleotide excision repair
cart03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PA27867_1052
03430 Mismatch repair
PA27867_1052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cart03400
]
PA27867_1052
Enzymes [BR:
cart01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PA27867_1052
DNA repair and recombination proteins [BR:
cart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PA27867_1052
MMR (mismatch excision repair)
Other MMR factors
PA27867_1052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PAC2
SPEF2_C
Motif
Other DBs
NCBI-ProteinID:
ANP72019
UniProt:
A0A1B1BHF6
LinkDB
All DBs
Position
1:1199565..1201286
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AA seq
573 aa
AA seq
DB search
MSDPLTPTAESLLTGLDEQQRVAAEALIGPVCMLAGAGTGKTRAITHRIAYGVMSGAYSP
TRVMALTFTARSAAELRGRLRQLGAGGVAARTFHAAALSQLNYFWPHVVGGQAPRILEGK
GRLLGHVAEVLKLKLDTATLRDLAGEIEWRKTSGLSLEQYATAGRALPGRLDIDQALDMQ
AGYERLKDDRKQIDFEDVLLAMAGMIEAEPSVALQVREQYRFFVVDEFQDVSPLQYDLLK
LWLGDRRDLCVVGDASQTIYSFAGARSDYLLDFPKHYEDATVVRLEQNYRSTAAIVATAN
QLMRGRPGALSLHAAVAETGVEPAVREYPNDMAEARGVAQSIAELVAAGTAPENIAVLYR
VNVQAALLETALGDVGVSYQIRGSKRFFDLPEVKQAVMSLRAASVSIMGEPLFKSVSDVL
RGLGWSQTAPETRGAVRDRWEALNAIMGLVDQAAPGTSFRQFTDELMERQVGQHEPTVAA
VTLATLHSAKGLEWDAVFVVGLSEGLVPISYAGTFDQVDEERRLLYVGVTRARKRLSLSW
SAAGSQQRSPRERSRFLAEIGIRTARAAGARGA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgatccgttgacccccaccgccgagtccctgctgaccgggctcgacgagcagcag
cgcgtcgcggcggaggccctgatcggcccggtgtgcatgctcgccggtgccggcacgggc
aagacccgcgccatcacgcaccgcatcgcctacggcgtgatgagcggcgcctattcgccc
acccgggtgatggcgctcaccttcaccgcccgctccgctgcagagctgcgcggccggctg
cggcagctcggcgccggcggcgtcgccgcgcgaaccttccacgcggccgcgctctcgcaa
ctcaactacttctggccgcacgtcgtgggcgggcaggcgccgcgcatcctcgagggcaag
ggccggctgctcggccacgtggccgaggtgctcaagctcaagctggacaccgccaccctg
cgtgacctggccggcgagatcgagtggcgcaagacctccgggctgagcctggagcagtac
gccacggccggccgggcgctgccgggccggctggacatcgatcaggccctggacatgcag
gctggctacgagcggctcaaggacgaccgcaagcagatcgacttcgaggacgtgctgctg
gccatggccggcatgatcgaggccgaaccgtcggtggcgttgcaggtgcgggagcagtac
cggttcttcgtcgtcgacgagttccaggacgtgtcgccgctgcagtacgacctgctcaaa
ctctggctgggcgaccggcgggatctctgcgtggtcggcgacgccagccagaccatctac
tcgttcgcgggcgcccgcagcgactacctgctcgacttccccaagcactacgaggatgcc
acggtggtgcgcctcgagcagaactaccgctcgaccgcggccatcgtcgccaccgccaac
cagctcatgcgcggccggcccggcgcgctgtcgttgcacgccgccgtcgccgagaccggg
gttgagcccgctgtgcgggagtatcccaacgacatggccgaggccaggggtgtggcgcag
agcatcgccgaactggtcgccgccggcaccgcgcccgagaacatcgccgtgctgtaccgg
gtcaacgtgcaggccgcgctgctcgagacggcgctgggcgatgtgggcgtgagctaccag
atccgcggatcgaagcggttcttcgacctgcccgaggtgaagcaggcggtgatgtcgctg
cgcgcggcatccgtctcgatcatgggcgaacccctgttcaaatcggtcagcgacgttctg
cgcggcctgggctggagccagacggcgccggagacccgcggtgccgtgcgggaccggtgg
gaggcgctcaacgccatcatgggactcgtcgaccaggcggcccccggcacctcgttccgg
cagttcaccgacgaactcatggaacgccaggtcggccagcacgaacccaccgtcgcggcc
gtgaccctggccaccctgcactccgccaagggcctggagtgggacgcggtcttcgtcgtc
gggctgagcgaagggctcgtgccgatcagctacgccggcacgttcgaccaggtcgatgag
gaacgccgcctgctctacgtgggcgtcacccgggcccgcaagcggctgtcgctcagttgg
tccgcggccggaagccagcagcgttccccgcgagaacgatcacgttttctggcagaaatc
ggcatccgcaccgcacgtgcggccggtgcgcgcggcgcctga
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