KEGG   Cryobacterium arcticum: PA27867_1165
Entry
PA27867_1165      CDS       T04435                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cart  Cryobacterium arcticum
Brite
KEGG Orthology (KO) [BR:cart00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cart03400]
    PA27867_1165
Enzymes [BR:cart01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PA27867_1165
    5.6.2.6  RNA 3'-5' helicase
     PA27867_1165
DNA repair and recombination proteins [BR:cart03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PA27867_1165
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII DUF6406 AAA_22 Cas3-like_C_2 PhoH
Other DBs
NCBI-ProteinID: ANP72131
UniProt: A0A1B1BHQ7
LinkDB
Position
1:1329477..1334456
AA seq 1659 aa
MTEILQRLSPATRTWFTGAFDAPTEAQLGAWDAISRGSHTLVVAPTGSGKTLAAFLWALD
RLYSASTGEAAVTDAATGVAPASTDTGTRVLYISPLKALGVDVERNLRAPLVGIGQAAER
LGLAPVRVTVGVRSGDTPAADRRTLVKTPPEILITTPESLFLMLTSAARETLRGVDTVII
DEIHAVAASKRGAHLAVSLERLDALLAKPAQRIGLSATVRPASEVARFLGGQAPVEIVAP
KNEKRFDLRVIVPVDDMTQLGAVPAPEGATSAAAPQTGSIWPHVEEAIVDAVLAHSSSIV
FANSRRLAERLTARFNEIYSERLDAAEQAQLVLAGGDAAAGADAVGTTSAARTAVAAPAR
PPAELMGGSGQTEGAELLLARAHHGSVSKEQRAMIEDDLKSGRLRCVVATSSLELGIDMG
EVDLVVQVESPPSVASGLQRVGRAGHQVGEVSRGIIFPKHRADLIHATVAAERMVSGMIE
SLQVPANPLDILAQQTIAAVALEPIDAEEWFDAVRRSAPFATLPRSAYEATLDLLAGRYP
SDQFAELRPRIIWDRDSGLLTGRPGAQRLAVTSGGTIPDRGLFGVFMVGGDSATGRRVGE
LDEEMVYESRVGDVFALGATSWRIQEITHDRVLVLPAFGEPGRLPFWKGDGLGRPAELGA
AIGAFLREVSALTPAKARARCLAVGLDERAVTNLLAFLDEQRAATRYLPTDQTLVVERFR
DELGDWRVILHSPFGLTVHAPWALAVGARVRERFGIDGACVASDDGIVVRIPDTESEPPG
ADLFVFDPDELEQLVTDEVGGSALFASRFRECAARALLLPRYRPGSRSPLWQQRQKASQL
LDVAREYPSFPIILETIRECLQDVYDLPALVALTKQVASRAIRLVETSTDSASPFANALL
FGYVAAFMYEGDSPLAERRATALSIDSGLLAELLGRVELRELLDPVVMERTDAELQRLAP
DRRARGLEGVADLLRGLGPLTVDEVAARLQAYGVPESAETADAGAPGSGTTDGDDASAPP
AATEAEARAHLDTLTAARRALKVGIAGEERWAVIEDAGRLRDALGVPLAPGIPEAFTESV
KDPLGDLVSRYARTHGPFTTADVAARFGFGSAIALGALRRLADARRIVEGEFRPHGSGSE
WCDAEVLRRLRRRSLAALRHEIEPVDQATLGRFLPAWQHVGGKLRGVDGVVSVIEQLEGA
RIPASAWETLILPARVSDYHPGMLDELTNAGEVLWAGAGTLAGNDGWVSLHLTDTAPLTL
PVPTELETTPLQREILATLGGGGGYFFRQLADSVGSQDDGELIEALWDLVWSGLVSNDTF
APVRSLVSGGKSAHSTRRAAPRARLHRGRALPRATMPSRQGPPTVSGRWSIVPVADTSAT
RRAHALGETMLERYGVVTRGAVMGENVLGGFALVYKTLSGFEEMGRCRRGYFVEGLGASQ
FATAGTIDRMRGYVDERERAERGDRSAPTAVTLAATDPANPYGAVLPWPALPEGTGHRPG
RKAGGLVVLVDGHLVLYVERGGKSMLVFDPAAAAATATATGQDTGAGDPDAGPTGGSRTA
SARSAPAGSAQAGSPGARTASAGSAGSSSASGHTGAQRAAPSETVLAATRSLAATVTTGR
VPKLAVETVNADFVLGTTVGDALRAAGFTETPRGLRLSA
NT seq 4980 nt   +upstreamnt  +downstreamnt
atgacggagattctccagcgcctctcgccggctacccgcacgtggttcaccggcgcgttc
gacgctcccaccgaggcgcaactcggcgcctgggatgccatctcacgcggttcgcacacc
ctcgtcgtcgcccccaccgggtcgggcaagaccctggcagcgttcctctgggcgctcgac
cgcttgtactcggcctccacgggtgaggccgccgtgacggatgccgcaaccggcgtcgca
cctgcctccactgatacaggcacccgggtgctctacatctcgccgctgaaggccctcggc
gtggacgtggaacgcaacctgcgcgccccgctcgtgggcatcggccaggccgcagaacgg
ctgggcctggcgccggtgcgggtgaccgtgggcgtccgcagcggcgacaccccggcggcc
gaccgccgcaccctcgtcaagacgccgcccgagatcctcatcaccacgcccgagtcgctc
ttcctcatgctcacgtccgccgcccgggagaccctccgcggggtggacaccgtgatcatc
gacgagatccacgccgtcgcggccagcaagcgcggcgcgcacctcgccgtgtcgctggag
cgcctggacgcactgctggccaaacccgcccagcgcatcggcctgtccgccacggtgcgg
ccggcctccgaggtggcccgattcctcggcgggcaggctcccgtggagatcgtggcgccg
aagaacgagaagcgcttcgacctgcgagtcatcgtgcccgtcgacgacatgacccagctc
ggcgccgtgcccgctccggagggcgccacctccgccgcggccccgcagaccgggtcgatc
tggccgcacgtggaggaggcgatcgtggatgccgtgctcgcgcactcctcctcgatcgtg
ttcgccaactcccgacgcctggccgagcggctcacggcgcggttcaacgagatctacagc
gagcggctcgacgcagccgagcaggctcagctcgtgcttgcgggcggggatgccgccgcc
ggcgcggacgccgtggggacgacatccgcggcacgcacggccgtcgcggcaccggcccgg
ccgcccgccgaactgatgggcggcagcggccagaccgagggcgccgagctgctgctggcg
cgcgcccaccacggatcggtgagcaaggaacagcgggccatgatcgaggacgacctcaag
tccgggagactccgttgcgtggtggccacctcgagcctggagctcggcatcgacatgggc
gaggtcgacctggtggtgcaggtggagtcgccgccgtcggtggccagcggcctgcagcgc
gtgggccgggccggccaccaggtcggcgaggtctcccgcggcatcatcttccccaaacac
cgggccgacctgatccacgccaccgtcgcggccgagcggatggtgtcgggcatgatcgaa
tcgctgcaggtgcccgcgaacccgctcgacatcctcgcccagcagaccatcgccgcggtc
gccctcgaaccgatcgacgccgaagagtggttcgacgccgtgcggcgcagcgccccgttc
gcgaccctgccgcgctcggcctacgaggccaccctcgacctgctcgccggccggtacccg
tccgaccagttcgccgaactgcggcctcggatcatctgggaccgcgactccggcctgctc
accggtcggcccggcgcccagcgcctggccgtcacgagcggcggcaccatccccgaccgc
ggcctgttcggggtgttcatggtcggcggcgactcggccaccggtcgccgggtgggcgag
ctcgacgaggagatggtctacgagtcccgcgtcggcgacgtgttcgcgctcggagccacg
agctggcgcatccaggagatcacccacgaccgggtgctcgtgctgcccgcgttcggcgaa
cccggccggctgccgttctggaagggcgacggcctgggccggcccgccgaactcggcgcg
gccatcggcgcgttcctccgcgaggtgtccgcgctcaccccggcgaaggcccgcgcgcgc
tgcctggccgtgggcctggacgagcgggccgtcaccaacctgctggccttcctcgacgaa
cagcgcgccgccacccgctacctgcccaccgaccagaccctcgtggtcgagcggttccgc
gacgaactcggcgactggcgggtcatcctgcactcgccgttcggcctcaccgtgcacgcg
ccgtgggccctcgccgttggcgcccgggtgcgcgagcgtttcggcatcgacggcgcctgc
gtcgcgagcgacgacggcatcgtcgtgcgcatccccgacaccgagtcggagccgcccggc
gccgacctcttcgtcttcgaccccgacgaactggagcaactcgtcaccgacgaggtcggc
ggctccgccctgttcgcctcccggttccgcgagtgcgcggcccgggcactgctcttgccc
cggtaccggccgggcagccgctcaccgctctggcagcaacgccagaaggcctcccagctg
ctcgacgtggcccgcgaatacccgtcgttcccgatcatcctcgagaccatccgcgaatgc
ctgcaggatgtctacgacctgcccgccctcgtggcgctgaccaagcaggtggccagccgc
gccatccgcctggtggagaccagcaccgactcggccagcccgttcgccaacgcgctgctg
ttcggctacgtcgccgcgttcatgtacgagggcgattcaccgctggccgaacgccgcgcc
acggccctgtcgatcgactccggcctgctcgccgagctgctcggccgggtggagctgcgc
gagttgctcgaccccgtcgtgatggaacgcaccgacgccgaactgcagcgtctcgccccc
gaccgccgtgcccgcgggctggaaggcgtcgccgacctgctccgcggcctcggcccgctc
accgtcgacgaggtcgccgctcggctgcaggcctacggcgtgcccgagagcgctgagacc
gcggatgcgggggcgcccgggtccggcacgaccgacggcgacgacgcatccgcaccgccc
gccgccaccgaggcagaggcccgcgcccacctcgacacgctcaccgccgcgcggcgcgcc
ctcaaggtgggcatcgccggcgaggaacgctgggcggtgatcgaggacgccggccggttg
cgcgacgccctcggcgttccgctggccccgggcatccccgaggccttcaccgagagtgtg
aaagacccgctcggcgacctcgtcagccggtacgcccgcacccacggtccgttcaccacg
gccgacgtggcggcccgattcgggttcggcagcgccatcgccctgggcgccctgcgccgg
ctggcggatgcgcgacgcatcgtcgagggggagttccgcccgcacggcagcggcagcgag
tggtgcgacgccgaggtactgcggcggctgcgccgccgctcgctcgcggcgttgcggcat
gagatcgaacccgtggaccaggccaccctcggccggttcctgccggcctggcagcatgtc
ggcggcaagctccgcggggtcgacggcgtggtctccgtgatcgaacagctcgagggcgcc
cgcatcccggcgtccgcctgggagaccctgatcctgcccgcccgggtgagcgattaccac
ccgggcatgctcgacgaactcaccaacgcgggcgaggtgctctgggccggcgccggtacg
ctggccggcaacgacggctgggtgagcctgcacctgaccgacaccgcaccgctcaccctg
cccgttcccaccgaactggagaccaccccgttgcaaagggagatcctcgccaccctgggc
ggcggcgggggctacttcttccggcagctggccgactcggtcggcagccaggacgacggt
gagctcatcgaggcgctctgggacctcgtctggtccggcctggtgagcaacgacaccttc
gccccggtgcgctcgctggtctccggcggcaagtcggcgcactccacgcgccgcgccgcg
ccgcgcgcccggctgcaccgtggccgtgccctgccccgggccaccatgcccagccggcag
ggaccgcccacggtctccggtcggtggtcgatcgtgcccgtcgccgacacctccgccacc
cgtcgtgcgcacgccctgggcgagaccatgctcgaacgttatggcgtcgtcacccgcggc
gctgtcatgggtgagaacgtgctcggcggcttcgccctggtgtacaaaaccctcagtggc
ttcgaggagatgggccggtgccgccgcggttacttcgtcgaggggctcggcgcctcccag
ttcgccaccgccggcaccatcgaccggatgcgcggctacgtcgacgagcgtgagcgcgcc
gagcgcggcgaccggtcggcgcccaccgcggtgaccctcgccgccaccgacccggccaac
ccgtacggcgccgtgctgccgtggcccgcgctgcctgagggcaccggacaccggccgggc
cgcaaggcgggcggcctcgtcgtgctcgtcgacgggcacctggtgctctacgtggagcgc
ggcggcaaatcgatgctcgtattcgaccccgccgctgccgccgccaccgccaccgccacc
gggcaggacacgggcgctggcgaccccgacgcgggtcccaccggtggatcgcggaccgcg
tccgcgcggtcggccccggccggttctgcgcaggctggctcgcctggggcacggacggcc
tcggcaggctctgccgggtcgtcctcggcatctggccacacgggtgcacaacgggcggcg
ccgtcggagaccgtgctggcggccacccgctcgctggccgcgacggtcaccaccggaagg
gtgcccaagctcgccgtggaaaccgtgaacgccgacttcgtgctcggcaccacggtgggc
gacgccctgcgcgcggccggcttcaccgagaccccgcgggggctgaggctcagtgcctga

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