Chimaeribacter arupi: P0E69_02685
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Entry
P0E69_02685 CDS
T09246
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
caru
Chimaeribacter arupi
Pathway
caru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0E69_02685 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caru03019
]
P0E69_02685 (pnp)
03016 Transfer RNA biogenesis [BR:
caru03016
]
P0E69_02685 (pnp)
Enzymes [BR:
caru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P0E69_02685 (pnp)
Messenger RNA biogenesis [BR:
caru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P0E69_02685 (pnp)
Transfer RNA biogenesis [BR:
caru03016
]
Prokaryotic type
tRNA degradation factors
P0E69_02685 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
S1_RRP5
KH-I_KHDC4-BBP
UPF0181
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
WKZ92875
LinkDB
All DBs
Position
561101..563218
Genome browser
AA seq
705 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDGFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTADELKQSKLDLVVA
GTQGAVLMVESEAQLLSEDQMLGAVVFGHEQQQVVIENINSLVAEAGKPKWNWQPEPVNE
ALHTRVAELAESRLGDAYRITDKQARYAQVDAIKADVSAALLAQDESLDDGEIMDVLGHI
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGERTDNFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKYAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLEMGQEVPVKVLEVDRQGRVRLSIKEATTPTPEAAAPAAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgtacgcaaattccaatacggccagcacaccgtaacgctggaaacc
ggcatgatggcccgccaggcgactgccgctgtgatggtaagcatggacgacaccgcggtt
ttcgttaccgtcgtcggtgccaaaaaagcgaagccgggccaggacttcttcccgctgact
gttaactatcaagaacgtacctatgcggcaggccgcatcccgggcagtttcttccgtcgt
gaaggccgcccgagcgaaggcgaaaccctgacctcccgcctgattgaccgcccaatccgt
cctctgttcccagacggcttcctgaacgaggttcaggtcatcgcgaccgtagtgtctgtt
aacccacaggttaacccggatatcgtggcgatgattggcgcgtctgctgcactgagcctg
tccggcattccgttcaatggcccgattggtgctgcgcgcgttggttacatcaatgaccag
tacgtgctgaacccgactgcggatgaactcaagcaaagcaaactggacctggtagttgcc
gggacccagggtgccgtgctgatggtggaatccgaggcgcagctgctgagcgaagatcag
atgctgggtgctgtggtctttggccatgagcaacagcaagtggttatcgagaacatcaat
tctctggtcgctgaagccggtaaaccaaaatggaactggcagccggagccggtgaacgaa
gccctgcacacccgtgtggcagaactggctgagtcccgcctgggcgatgcttaccgcatc
actgacaaacaagcgcgttatgcgcaggttgacgccattaaagcggacgtcagcgctgcc
ctgctggcacaagatgaatcgctggatgacggcgaaatcatggatgtgttgggtcacatt
gagaaaaatgtggtgcgcagccgcgtattgcgtggtgagccgcgtatcgacggccgtgaa
aaagacatgatccgtggtctggacgtccgtaccggcgtgctgccgcgtacccacggttcc
gcactgttcacccgtggtgagacgcaggcgctggttaccgcgacgctgggtactgcacgt
gatgcgcagaaccttgatgagctgatgggcgagcgcaccgataacttcctgttccactat
aacttccctccgtactcggtcggggaaacaggcatggtaggttcaccgaaacgtcgtgaa
atcggccatggtcgtctggcgaagcgcggtgtgctggctgttatgccggaagctgatgcg
ttcccgtacaccgtgcgtgtggtgtctgaaatcacggagtccaacggttcctcctctatg
gcgtccgtatgtggtgcctccctggcgctgatggatgccggcgtgccgatcaaggccgct
gtagcaggtatcgcgatgggtctggtgaaagagggcgagaactttgtcgtgctgtctgac
atcctgggtgacgaagaccacctcggtgacatggacttcaaagtagccggtagccgcgaa
ggtatcactgctctgcagatggatatcaaaatcgaaggcatcacccgtgaaatcatgcag
gtggcactgaaccaggccaagggtgcgcgtctgcacatcctgggtgtgatggaacaggcg
atcagcacgccgcgtggtgacatctctgagttcgctccgcgcatccacaccatcaaaatc
aatcctgataagatcaaggatgtgattggtaaaggcggctctgttatccgtgcgttgacg
gaagagaccggcaccaccatcgaaatcgaagatgacggtaccgttaaaattgccgcaaca
gatggtgacaaagccaaatacgcgattcgccgtatcgaagagatcaccgctgaaatcgaa
gtaggccgcatctatcagggcaaagtgacccgtatcgttgatttcggtgccttcgtggct
atcggcggcggtaaagaagggctggttcatatttctcagatcgctgacaagcgcgttgag
aaagtgaccgactacctggaaatgggtcaggaagtcccggttaaggtactggaagttgat
cgccagggccgtgtgcgtctgagcattaaagaagcaacgacgccaactccggaagcggct
gcacccgcagcagaataa
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