Chimaeribacter arupi: P0E69_04140
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Entry
P0E69_04140 CDS
T09246
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
caru
Chimaeribacter arupi
Pathway
caru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P0E69_04140 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caru03400
]
P0E69_04140 (recB)
Enzymes [BR:
caru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P0E69_04140 (recB)
DNA repair and recombination proteins [BR:
caru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P0E69_04140 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WKZ93132
LinkDB
All DBs
Position
894252..897812
Genome browser
AA seq
1186 aa
AA seq
DB search
MTTSAPLALNPLTLPLYAERLIEASAGTGKTFTIGILYLRLLLGLGREAAFPRPLTVEEI
LVVTFTEAATEELRGRIRENIHALRLACVRGSSSDGMLQALMAEIADLADAAALLLAAER
QMDEAAIYTIHGFCQRMLTHNAFESGILFEQTLVQDEMPLRRQACADFWRRHCYPLPIEI
ARPVGQAWSGPEELLRDLAPYLHGEAPALRYPPAEGETLQSRHARIIARISEVKQAWNSA
AGELEALISASGVDKRSYSSRYLPLWLEKVSEWCALETQDYQLPAELEKFSQARLLEKTK
KGEPPRHPVFTLIEQLCTEPLSLRDVVMAQAITEIRQTVQKEKRQRAEMGFDDLLSRLDE
ALQAEGGGALAEAIRARYPVAMIDEFQDTDPQQYRIFRTLYGNQPQCGLLLIGDPKQAIY
AFRGADIFTYMRARAEVSAHYTLGTNWRSSHPMVAAVNTLFQQKDDPFIFSEIPFSPVSA
AARNQALAFEVSGERQPALHFWLQSGEGVGVSDYQQMMARQCAGQISHWLSAGQRGEAWL
VNGGERRAVRASDITVLVRNRIEAALVREALGALAIRSVYLSNRDSVFDTPEARDMLWLL
QAVLAPEQERTLRSAMATGVMGLDARTLAELSASETDWDALVLEFDGYREHWERRGVLPM
LRELMRKRHLAENLLVSEEGERRLTDFLHLGELLQEASSQLESDYALVRWLAQQIAQPEK
QAENEQLRLESDRHLVQIVTIHKSKGLEYPLVWLPFIAHFRPQQQALYHDRQTFAALLDL
REEEESKALAEEERLAEDLRLLYVALTRSVFHCSIGIAPLIQGNRKKQGDTDLHRSALGY
LIQKGETCDAFALAELLGALADESIALTQIAEPAVQPWEAPAPPALALEAREFSRHVGDN
WRVTSYSGLQQHGSALAEALLPRLDIDAAGEQQPETTPGMTPHTFPKGASPGTFLHSLFE
EIDFSQTPDRAWLEEKLTAQGFGSEWGEVLAGWLEQVLQAPLGPEGLSLRQLPPAQRQAE
LQFYIPIRGLLRAADLDRLVKQYDPLSAACPPLDFRQVKGMLKGFIDLVFCWEGKFYLLD
YKSNWLGESAAAYTQPAMAQAMAEHRYDLQYQLYSLALHRYLRHRLAGYDVDRHFGGVIY
LFLRGIDQQHPENGIFRCRPPSDFIREMDALFEGHTLSLTEAGSPS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtccgcgcccctcgccctgaacccgctgaccctgccgctctatgcggagcgg
ctgattgaggcctcagcgggtaccggcaagaccttcaccatcgggatcctctacctgcgc
ctgctgctggggctgggcagggaggcggccttcccgcgcccgctgacggtcgaggagatt
ctggtggtgaccttcaccgaggcggcgaccgaagagttgcgcggccgtatccgcgagaat
atccatgccctgcggctggcctgtgtgcgcggcagcagcagtgacggcatgttacaggcg
ctgatggcagagattgccgatctggccgatgccgccgcgttgctgctggcggccgaacgg
cagatggatgaagccgcgatttacactattcacggtttctgccagcggatgctgacccac
aatgcatttgagtccggcatcctgtttgagcagacgctggtgcaggatgaaatgccgttg
cgccgtcaggcgtgtgctgacttctggcggcggcactgttacccactgccgattgagatt
gcccggccggtggggcaggcgtggagcggcccggaggagttgctgcgcgatctggcccct
tatcttcacggcgaagccccggcgctgcgttacccgcctgccgaaggtgaaacgttacag
agccgccatgcgcggatcattgcccgcatcagcgaggtaaaacaggcatggaacagtgcg
gcgggggagctggaagcgctgatttctgcttccggcgtcgacaagcgcagttacagcagc
cgttacctgccgctctggctggagaaagtcagtgagtggtgcgcgctggagacgcaggat
taccagttgccggcagaactggaaaagttcagccaggcgcggttgctggaaaaaaccaaa
aaaggtgagccgccgcgccacccggtatttacgctgatcgagcagctctgtactgagccg
ctctctctgcgcgatgtggtgatggcgcaggcgatcacagaaatccgccagacggtgcag
aaagagaagcgccagcgggctgaaatgggctttgatgacctgctcagccggttggatgag
gcgttacaggccgaaggcggcggggcgctggccgaggcgatccgcgcccgctacccggtg
gcgatgatcgatgaattccaggacaccgacccgcaacagtaccggatcttccggaccctt
tacggcaaccagccgcaatgcggcctgctgctgatcggtgaccccaaacaggccatttac
gctttccgtggggcggatattttcacctacatgcgcgcccgtgcagaagtgagcgcccac
tatacgctcggcaccaactggcgttcctcccacccgatggtggccgcggtgaatacgctg
ttccagcagaaagacgatccctttattttcagtgagatcccgttcagcccggtttccgca
gccgcccgcaaccaggcgctggcgtttgaggtgtccggcgaacggcaaccggcgctgcat
ttctggctgcaatcgggtgagggcgttggcgtcagtgattaccagcagatgatggcgcgc
cagtgtgccgggcagatcagccactggctctctgccgggcagcgcggcgaggcatggctg
gtcaacggcggggaacggcgcgcggtcagggcgtcggacatcacggtgctggtgcgtaac
cggattgaggctgcgctggtgcgggaggcgctgggcgcgctcgccatccgctcggtttac
ctctccaatcgtgacagcgtatttgatacccccgaagcgcgggacatgctctggctgttg
caggcggtgctggctccggagcaggaacgtaccctgcgcagcgcgatggcgaccggcgtg
atggggctggacgcccgtacgctggcggagctgagcgccagtgaaaccgactgggatgcg
ctggtgctggagtttgacggctaccgcgaacactgggagcggcgcggcgtgctgccgatg
ctgcgtgagctgatgcgcaaacgccatctggcagagaacctgctggtcagcgaagagggc
gagcgccggttaacggatttcctgcatttgggtgaactgttgcaggaggcctcttcccag
ctggagagcgactacgcgctggtgcgctggctggcccagcagattgcccagccggagaag
caggcggaaaacgaacagctgcgcctcgaaagcgatcgccatctggtgcagattgtaacc
atccataaatccaaagggctggagtatccgctggtgtggctgccgtttatcgcccatttc
cgcccgcagcagcaggcgctctaccatgaccgccagacgttcgcggcgctgctcgacttg
cgggaggaagaggagagcaaggcactggcggaagaggaacggctggcggaggatttgcgc
ctgctgtatgtggccctgacccggtcagtgtttcattgcagcatcggcattgcgccgttg
attcagggtaaccgcaaaaagcagggcgacaccgatctgcaccgcagcgcattgggctac
ctgatccagaaaggggaaacgtgtgacgcctttgccctggcggagctgctgggcgcgctg
gcggatgagagcatcgcgctgacccagattgccgaaccggcggtgcagccgtgggaagcg
ccggctcccccggcgctggcgctggaggcgcgggagttctcccgtcacgtcggggataac
tggcgggtcaccagctattccggcttgcagcagcacggcagcgcactggcagaagccctg
ctgccgcggctggacattgacgctgccggggagcagcagccggaaaccacaccgggcatg
acgccgcacaccttcccgaaaggggcgtcgcccggcaccttcctgcacagtttgtttgaa
gagatcgacttcagccagacaccggatcgcgcctggctggaggagaaactcacggcccag
ggcttcggcagcgagtggggcgaggtgctggccggctggctggaacaggtgctgcaggcg
cctttggggccggaggggctgtcattgcggcaactgccgcctgcgcagcggcaggcggaa
ctgcaattctatattccaatccgtggcctgctgcgcgcggcggatctcgaccgtctggtg
aagcagtatgatccgctatcggctgcctgcccgccgctggatttccggcaggtgaaaggg
atgctgaaagggtttattgacctggtgttctgctgggaaggaaagttctacctgctggat
tataaatccaactggctgggcgagagtgccgctgcctatacccagcccgcgatggcgcag
gcgatggccgaacaccgctatgacctgcaataccagctctacagcctggcgctgcaccgc
tatttgcggcaccgcctggctggctatgacgtcgaccgccactttggcggcgtgatttat
ctttttttgcgtgggatcgaccaacagcatccggaaaacggcattttccgctgccgcccc
ccgtcggactttatccgcgagatggatgccttgttcgaaggccacacgctctctcttact
gaggcaggatcaccttcatga
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