Chimaeribacter arupi: P0E69_17785
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Entry
P0E69_17785 CDS
T09246
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
caru
Chimaeribacter arupi
Pathway
caru02020
Two-component system
caru02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
caru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P0E69_17785 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P0E69_17785 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caru03021
]
P0E69_17785 (rpoN)
Transcription machinery [BR:
caru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P0E69_17785 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WKZ92004
LinkDB
All DBs
Position
3862346..3863779
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDIHDEIDARE
STDSEALDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDDTGYLTATLDEILESIGDDNVTMDEVEAVLK
RVQRFDPIGVAARDLRDCLLIQLSQFVPGLPYLAEAKLIVSEHLDLLGNHDFRSLMRSTR
LKEDTLKGAMQLIQSLDPRPGQSINTGESEYVIPDVLVRKHQGVWTVELNADSVPRLKIN
QQYAALGGSTRSDSDGQFIRSNLQEAKWLIKSLESRNETLLKVTRCIVEQQQAFFEKGEE
YMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVSTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATLLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccagcaactggccatgactccccagctccag
caggccatccggctgctgcagctctccacgcttgaactgcagcaggagatccaactggca
ttagagagcaacccgctgcttgaacagacggacattcacgacgaaatcgacgccagggag
agcaccgacagcgaggccctcgacacccgcgaagccctcgagcagaaggatatgcccgag
gagctgccgctggatgccacctgggatgagatctacaccgccggcaccccgtccgggacc
ggcaccgactacagcgatgacgagctgccggtctaccagggcgaaaccacccagaccctt
caggactacctgatgtggcaggtggatctcacccccttctccgacaccgacgccgccatt
gccacctccattgtggatgcggtggacgataccggctacctcaccgccacactggatgag
atcctcgaaagcatcggcgacgacaacgtcacgatggacgaagtggaagcagtgctgaaa
cgcgtgcagcgcttcgacccgattggcgtcgccgcgcgtgacctgcgcgactgtttgctg
atccagctctcgcagtttgtgcccggcctcccctacctggcggaagcgaaactgattgtc
agcgaacacctggatctgctcggcaatcacgatttcaggagcttaatgcgttcgacccgg
ctaaaagaggatacacttaaaggggcgatgcagctgatccagtcgctggacccgcgcccc
ggccagtcgatcaacaccggcgaatcagagtatgtgatcccggatgtgctggtgcgcaag
catcagggtgtctggacggtggagctgaacgcggacagcgtgccgcgcctcaaaattaac
cagcagtatgcggcgctgggcggctccacccgcagcgacagcgacggccagttcatccgc
agcaacctccaggaagccaaatggctgatcaagagcctggagagccgcaacgagacgctg
ctgaaagtgacgcgctgcatcgtggagcagcagcaggcattctttgagaagggtgaagag
tacatgaaaccgatggtgctggcggacatcgcccaggccgttgatatgcatgagtccacc
atttcccgcgtgactacgcagaagttcctgcacagcccgcgcggcatttttgaactgaag
tatttcttctcaagccacgtgagcacagacagcggcggcgaggcgtcttctaccgccatc
cgtgccctggtgaagaaattaattgcggctgaaaaccccgcgaaacctctgagtgacagc
aagctggcgaccctgctttccgaccaggggatcatggtagcccgtcgtactgttgcaaaa
taccgagagtctttgtccatcccgccgtcgaaccaacgcaaacaactggtttga
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