Chimaeribacter arupi: P0E69_18895
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Entry
P0E69_18895 CDS
T09246
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
caru
Chimaeribacter arupi
Pathway
caru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0E69_18895 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caru03019
]
P0E69_18895 (recQ)
03400 DNA repair and recombination proteins [BR:
caru03400
]
P0E69_18895 (recQ)
Enzymes [BR:
caru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P0E69_18895 (recQ)
Messenger RNA biogenesis [BR:
caru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P0E69_18895 (recQ)
DNA repair and recombination proteins [BR:
caru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P0E69_18895 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WKZ92196
LinkDB
All DBs
Position
complement(4119049..4120881)
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AA seq
610 aa
AA seq
DB search
MSTAAVINKALLAEQVLHDTFGYQQFRPGQQTIINTALEGRDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLLANGVAAACLNSSQTREQQHEVLAACRSGQIKMLY
IAPERLMMDNFLDQLPQLNPAMLAVDEAHCISQWGHDFRPEYRALGQLKSRFPDLPVIAL
TATADDATRNDIVRGLALHDPLVEISSFDRPNIRYTLVEKYKPLDQLWRFVQDQRGKCGI
IYCGSRAKVEDTTARLQARGLSVGAYHAGLESEQRARVQDAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRTIEAYYQETGRAGRDGLPAEAILLYDPADMAWLRRCLEEKPAGPQ
QDVERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQTPCGNCDICLDPPKRYDGLLDAQKAL
SAVARVGQRFGIGYVVEVLRGANNLRIRDNGHDKLSVYGLGRDQTTEHWVSVFRQLIHLG
MISQNIAMHSALQLTEAARPVLRGDAPLQLAVPRIQAPKTRSGSTPKSYGGNYDRKLFAK
LRKLRKSIADEANVPPYVVFNDATLLEMAEQMPTSPGELLSVNGVGQRKLERFGTPFLSM
IRDHLDNDDD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggcagtaatcaataaagcgttgctggccgagcaggtgttacacgacacc
ttcggctaccagcaattccgtccgggtcagcaaaccatcattaacaccgcgcttgaaggg
cgcgactgtctggtggtgatgcccaccggtggcggcaaatccctgtgttaccaaatccct
gccctggttatggatggcctgacgctggtggtctcaccgctgatctccctgatgaaagac
caggttgaccagctgctggccaacggtgtggccgcggcatgcctgaattccagccagacc
cgcgagcagcagcacgaggtgctggcagcctgccgcagcggccagatcaagatgctctac
atcgcgccggaacggctgatgatggacaacttcctcgaccagttgccgcagcttaacccg
gcgatgctggcggttgacgaagcacactgtatttcccaatggggccatgatttccgccct
gagtaccgtgcgcttgggcaactgaaatcccgcttccccgatctgccggtgatcgccctc
acggccaccgccgacgacgccacgcgcaatgacatcgtgcgtgggctggcgctgcatgac
ccgctggttgagatcagcagctttgaccggccgaacatccgctacaccctggtggaaaag
tacaaaccgctcgaccagctctggcgcttcgtgcaggaccagcgcggcaaatgcggcatc
atttactgcggcagccgggcgaaagtggaagacaccaccgcacggttgcaggcgcgcggc
ctgagtgtcggcgcgtaccatgccgggctggagagtgagcagcgcgcccgggtgcaggac
gccttccagcgtgatgatttgcaggtggtggtggcgaccgtggcgttcggcatgggcatc
aacaaacccaacgtgcgtttcgtggtgcactttgacatcccgcgcaccatcgaggcctat
tatcaggaaaccgggcgcgccgggcgtgacggcctgcccgccgaggcgattttgctgtat
gacccggccgacatggcctggttacgccgttgcctggaggagaaacccgccgggccgcag
caggacgtggaacgccacaaactcaatgcgatgggggcctttgcggaagcgcagacctgc
cgccgcctggtgttgctgaactacttcggcgaagggcggcagacgccgtgcggcaactgc
gacatctgccttgatccgccgaaacgttacgacgggctgctggacgcgcagaaagcgctc
tccgcggtggcgcgggtcggccagcggttcggcatcggctatgtggtggaagtgctgcgc
ggcgcgaataacctgcgtatccgtgacaacggccacgataagctgtcggtgtatggcctg
ggccgcgaccagaccaccgagcactgggtcagcgtgttccgccagctgatccacctcggg
atgataagccagaacatcgccatgcattcggcactgcaactcaccgaggcggcgcggccg
gtgctgcgcggtgacgcgccgctgcaactggcggtgccgcgtatccaggcaccgaaaacg
cgcagcggcagtacccccaaaagctacggcggcaattacgaccgcaagctgttcgccaaa
ttgcgtaaattgcgcaaatcgattgccgatgaggcgaacgtgccgccctatgtggtcttc
aatgacgccaccctgctggagatggcggaacagatgccgacttcgccgggcgagctgctc
agcgtcaacggcgtcggccagcgcaaactggagcgcttcggcacgccgttcctcagcatg
atccgtgaccatctcgacaacgacgacgactga
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