Chimaeribacter arupi: P0E69_19070
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Entry
P0E69_19070 CDS
T09246
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
caru
Chimaeribacter arupi
Pathway
caru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0E69_19070 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caru03021
]
P0E69_19070 (rho)
03019 Messenger RNA biogenesis [BR:
caru03019
]
P0E69_19070 (rho)
Transcription machinery [BR:
caru03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P0E69_19070 (rho)
Messenger RNA biogenesis [BR:
caru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P0E69_19070 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
WKZ92224
LinkDB
All DBs
Position
complement(4154944..4156203)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDITARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNMEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLATQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaacacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggcccgtatgcgcaaacaagacattatcttctccattcttaag
caacatgcgaagagtggtgaggatatcttcggcgacggcgtactggagatattgcaggat
ggcttcggcttcctccgttctgcagacagctcctacctcgccggtcctgatgacatctac
gtttctcccagccaaatccgccgctttaaccttcgtaccggtgacaccatttccggtaag
attcgtcccccgaaagagggtgagcgttatttcgcgctgctgaaagttaacgaagtcaac
tacgacaaaccagaaaacgcccgcaacaaaatcctgttcgaaaaccttaccccgctgcat
gccaattcccgtctgcgtatggaacgcggcaacggttccaccgaagacatcaccgcacgc
gtgctggacctggcctccccgattggccgcggccagcgtggcctgatcgtggcaccgccg
aaagccggtaagaccatgctgctgcagaacattgcgcagagcatcgcctataaccacccg
gactgcgtgctgatggtgctgctgattgacgagcgcccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagtggtcgcgtcgaccttcgacgaaccggcttcccgtcacgta
caggttgcggaaatggtgatcgagaaggccaagcgcctggttgagcacaaaaaagacgtg
atcatcctgctcgactccatcacccgtctggcgcgtgcctacaacaccgtggtgccggcc
tccggcaaggtgctgaccggtggtgtggacgccaacgccctgcaccgtccgaaacgcttc
ttcggtgcggcacgtaacatggaagagggcggcagcctgaccatcatcgccaccgcgctg
gtcgataccggttcgaagatggacgaagtgatttacgaagaatttaagggtacaggtaac
atggaactgcacctggcgcgtaaaattgctgaaaaacgtgtcttcccggcgattgattac
aaccgctccggtacgcgtaaagaagagttactggccacgcaggaagaactgcaaaaaatg
tggatcctccgtaagattattcacccgatgggtgaaatcgacgcgatggaattcctcatt
aataaactcgcgatgaccaaaacgaatgatgaattcttcgacatgatgaagcgctcataa
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