Chimaeribacter arupi: P0E69_22810
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Entry
P0E69_22810 CDS
T09246
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
caru
Chimaeribacter arupi
Brite
KEGG Orthology (KO) [BR:
caru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caru03016
]
P0E69_22810
Enzymes [BR:
caru01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
P0E69_22810
Transfer RNA biogenesis [BR:
caru03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
P0E69_22810
Prokaryotic type
tRNA splicing ligases
P0E69_22810
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Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
WKZ94797
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All DBs
Position
p251_DSM_115072:235533..236768
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AA seq
411 aa
AA seq
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MSKKPSDQIQLLTSPGGAPVKMWTQGVPVEPEARAQLQNTAKMPFIFKHLAVMPDVHLGK
GSTIGSVIPTRGAIIPAAVGVDIGCGMIAVRTSLTATDLPDNLAGLRSAIEQAVPHGRTT
ARSKRDKGAWDRTPQEVDNHWSTLAPRFKRLTDKYPQLLKTNNHQHLGTLGTGNHFIEIC
LDEQQRVWVMLHSGSRGVGNAIGTLFIALAQKDMQRHIANLPDRDLAYFEEGSRHFEDYM
AAVGWAQDFARHNREVMMSRVLAALSRVVPKPFMTQQEAVNCHHNYVQRERHFGEEVLVT
RKGAVSAQKGEMGIIPGSMGAKSFIVRGLGNAESFCSCSHGAGRTMSRTAAKKRFSVADQ
IRATAHVECRKDSEVIDEIPMAYKDIDAVMAAQSSLVEIVHTLRQVVCVKG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaaccgtccgatcagatccaactgctgacctcacccggcggcgcgccggta
aaaatgtggacgcagggtgtgcccgtcgagccggaagccagggcgcaattacagaacacc
gccaaaatgccgtttatctttaaacacctggccgtgatgccggatgtgcacctgggcaaa
ggctccaccatcggcagcgtgatccccacccgcggggcaattatcccggcggcggtcggt
gtggacatcggctgcgggatgattgctgtgcgcacctcgctgacggcaacggatttgccg
gacaacctcgccgggctgcgcagcgccattgagcaggcagtgccgcacgggcgtaccacg
gcgcgttccaaacgcgataaaggcgcgtgggatcgtacgccgcaagaggtggacaaccac
tggtcaacgctcgccccgcgctttaaacgcctgaccgacaaatatccgcagttgctgaaa
accaataaccaccagcacctcggcacgctgggcaccggcaaccactttattgagatctgc
ctggatgagcagcaacgggtatgggtgatgctgcacagcggctcgcgcggggttgggaat
gccatcggcacgctgtttattgcactggcgcagaaagatatgcagcgccatatcgccaat
ttgccggatcgcgatctcgcctattttgaagagggcagccgccattttgaggactatatg
gcggcggtcggctgggcgcaggatttcgcccgccacaaccgcgaggtgatgatgtcgcgg
gtgctggcggcgctctccagggtggtgccgaaaccctttatgacccagcaggaggccgtg
aactgccaccacaattatgtgcagcgggagagacattttggcgaagaggtgctggtcacg
cgtaagggcgcggtgtcagcccagaagggcgagatgggcattattcccggttcaatgggg
gcgaaaagttttatcgtccgggggctgggtaatgcagaaagtttctgttcgtgcagccac
ggcgccgggcggaccatgagccgcaccgctgctaaaaagcgtttcagcgtggctgaccag
atccgtgcgacagcccatgtcgaatgccgcaaagacagcgaagtgatcgatgaaattccg
atggcgtataaagatattgatgcggtgatggcggcgcaatcctcgctggtggagattgtg
cataccctccggcaggtagtgtgtgtgaaaggataa
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