Clostridium asparagiforme: NQ535_00465
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Entry
NQ535_00465 CDS
T08571
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
casp
Clostridium asparagiforme
Pathway
casp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NQ535_00465
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UWO76782
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Position
complement(103225..104982)
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AA seq
585 aa
AA seq
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MNMKKLFLLNLPYLLFVYPFDKLAQAFRLAPGADLSGKLLSIGDGFTAALSSPWLSFHPT
DLLIGIAGAVILRMAVYLKGKNAKKYRHGIEYGSARWGTAADIAPYMDKDFFQNIPMTQT
ERITMASRPKQPKYARNKNILVIGGSGSGKTRFFCKPSLLQAHSSYVCTDPKGTLLPEIG
AFLERKKYRIKCLNLINFRKSMKYNPLAYIRSEKDILKLVNALIMNTKGEGEKSSEDFWV
KAERLYYSALIGYIWYEATEEEKNFITLLDLINASEAREDDETYQSPVDLLFSQLEEREP
DHFAVKQYRKFKMAAGKTLKSILISCGARLAPFDIKELRDLMEYDELELDTLGDQKTALF
VILSDTDNTFNFVAALMYSQLFNLLCDKADDFYGGRLPVHVRLILDEFANIGQIPNFDKL
IATIRSREISASIILQSQSQLKTIYKDAADTIVGNCDSTLFLGGKEKSTLKEISELLGKE
TIDLYNQSENRGSQVSHGLSYQKLGKELMTQDELAVMDGGKCIFMLRGVRPFLSDKYDLT
RHPNYRYTADADPKNVFDMERYMKKQRTVVKPTDTFDVYEIDATT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaaaaaactgtttttgctgaaccttccgtatcttctgttcgtgtatcccttc
gataagctggcacaggctttccggcttgcgcccggtgctgacctctctggcaagctgctt
tccattggggacggcttcacggcagcgctttcctccccgtggctcagtttccatcccacg
gacctgctgatcggcatagccggtgcggtgattctccgcatggcagtctacctgaaaggc
aagaacgctaagaagtaccgtcacgggatcgagtatggttctgcccgctgggggacagcg
gcggatatcgccccctacatggacaaggactttttccagaacatccccatgacgcagacg
gagcgaatcacgatggcgagccgcccaaagcagccgaagtatgccagaaataaaaacatt
ctggtgatcggcggttccggcagcggcaagacgcggttcttctgtaagccgtcgctgctg
caagctcattcgtcctatgtctgcactgatccgaaaggaaccttgctgccggagatcggc
gctttcctggaacggaagaaataccgtatcaagtgcctcaacctgataaacttccgaaaa
tccatgaaatacaatccgctggcttatatccgatcagagaaagatatcttaaagctggtg
aacgccctgattatgaacacgaagggcgaaggcgaaaaatcttcggaagatttctgggtc
aaagcggaacgcctctattattccgcactgatcggctacatctggtacgaggccacggag
gaagaaaagaacttcatcacacttctggaccttatcaatgccagtgaagccagagaggac
gacgagacttatcaaagcccggtggacctgctcttttctcagttggaggaacgggagccg
gaccacttcgccgtcaagcagtaccgcaaattcaagatggcggcgggcaaaaccttaaaa
tccatcctcatttcctgtggcgcccggcttgctcccttcgacatcaaggagctgcgggac
ctgatggaatatgacgaactggaactggataccctgggcgaccaaaagacggcgctgttt
gtgatcctttcggatacggacaacactttcaatttcgtggccgccctcatgtatagtcag
cttttcaatctgctctgcgacaaggcggatgacttctacggcgggcggctgcccgtccat
gtccgtctgatcctggacgagtttgccaacatcggccagataccgaacttcgataagctg
attgccaccatccgaagccgtgaaatatcggcttctattattttgcagtcgcagagtcag
ctaaagaccatctacaaggacgcggcagataccatcgtcggtaactgtgacagcactttg
tttttgggaggcaaggagaaatccacgctcaaggaaatttcggagctgctgggaaaagag
accattgatctctataaccagtctgaaaaccggggcagtcaggtttcccatggcctcagt
tatcagaaattaggaaaggagttgatgacccaagacgaattggcagtgatggacggtggc
aagtgtatcttcatgctgcggggcgtgcgcccgttcctttcggacaagtacgacctcacc
cggcacccgaattacagatacacggccgacgccgaccctaaaaatgtctttgacatggaa
cggtacatgaagaagcagcgtaccgtggtaaaacccacggacaccttcgatgtgtacgag
attgacgcaacaacttaa
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