Clostridium asparagiforme: NQ535_02345
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Entry
NQ535_02345 CDS
T08571
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
casp
Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
casp03019
]
NQ535_02345
Messenger RNA biogenesis [BR:
casp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NQ535_02345
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
UWO77138
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All DBs
Position
529669..530616
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AA seq
315 aa
AA seq
DB search
MKYIDTLREGMHTTDVYLCKNKQIAVTKNGKEYGNLVLQDKTGTIDAKIWDLNSPGVGEF
ETMDYVHVEADVTLFQNSHQLNVRRIRRASEGEYVEADYLPVSKKNIDKMYEELLGFIAS
VKNPHLNQLLSKFFVESPAFAKAFKFHSAAKSVHHGFVGGLLEHTLSVVKLCDYYAGYYP
QLNRDLLITAAIFHDLGKTRELSTFPENDYTDDGQLLGHIIIGTEMVGRMIRAIPGFPER
TAVELKHCILAHHGELEYGSPKKPALLEALALNFADNTDAKMETMIEALNAGGENTGWLG
YNRLLETNIRKTTEL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattgatacactcagggagggtatgcacaccacggatgtgtacctgtgcaag
aacaaacagatcgccgtgaccaagaatggtaaggaatacggcaatctggtgctgcaggac
aagacgggtaccatcgatgccaagatctgggatttaaattccccgggagtgggcgaattt
gagaccatggactacgtgcacgtggaagcggatgtgaccctgttccagaattcccaccag
ctgaacgttcggcggatccgacgggcgtccgagggggagtacgtggaggcggattacctg
cctgtatcaaagaaaaatatcgacaagatgtacgaggaactgctgggcttcatcgccagc
gtgaagaatcctcatctgaaccagctcttgagcaagttttttgtggagagcccggcattt
gccaaggccttcaagttccactccgcggctaagagtgtacaccacggttttgtgggcgga
ctgctggagcacacgctgagcgtggtaaagctgtgcgattactatgcggggtattatccg
cagttaaaccgggatctattgatcaccgcggcgattttccatgatttagggaaaacgcgg
gagctgtcaacatttccggagaatgactatacggacgacgggcagcttttagggcatatt
attatcggaaccgagatggtggggcgcatgatccgcgcgatcccgggattcccggagcgg
acggcggtggagctgaagcactgtattctggcccaccacggggagctggagtacggctcg
ccgaagaaaccggcgctgctggaagctctggccctgaatttcgcggacaacacggacgcg
aagatggagaccatgatcgaggcgttaaacgcaggcggcgagaatacggggtggctggga
tataaccggctgctggagacgaatatccgaaagacgacggaattgtag
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