Clostridium asparagiforme: NQ535_05165
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Entry
NQ535_05165 CDS
T08571
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
casp
Clostridium asparagiforme
Pathway
casp00260
Glycine, serine and threonine metabolism
casp00460
Cyanoamino acid metabolism
casp00630
Glyoxylate and dicarboxylate metabolism
casp00670
One carbon pool by folate
casp00680
Methane metabolism
casp01100
Metabolic pathways
casp01110
Biosynthesis of secondary metabolites
casp01120
Microbial metabolism in diverse environments
casp01200
Carbon metabolism
casp01230
Biosynthesis of amino acids
casp01240
Biosynthesis of cofactors
casp04981
Folate transport and metabolism
Module
casp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NQ535_05165
09102 Energy metabolism
00680 Methane metabolism
NQ535_05165
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NQ535_05165
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NQ535_05165
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NQ535_05165
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NQ535_05165
Enzymes [BR:
casp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NQ535_05165
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UWO77682
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All DBs
Position
1097346..1098593
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AA seq
415 aa
AA seq
DB search
MVNQVMDLITSYDKEVGEAIQAECARQRRNLELIASENIVSEPVMMAMGTVLTNKYAEGY
SGKRYYGGCQCVDVVETLAIERAKKLFGCDYANVQPHSGAQANMAVFVAMLKPGDTVMGM
NLNHGGHLTHGSPVNFSGLYFHIVPYGVDDEGYIDYDELERIALESKPKLIIAGASAYAR
TIDFKRFREVADKVGAYLMVDMAHIAGLVAAGEHPSPIPYADVVTTTTHKTLRGPRGGMI
LANKEAAEKFNFNKAIFPGTQGGPLEHIIAGKAVCFGEALKPEFKEYQHQVVKNAQALAA
ALKEQGFKILTGGTDNHLMLVDLRGMEVSGKELQNRCDEVFITLNKNTVPNDPRSPFVTS
GVRIGTPAVTTRGLKEEDMPKIAECIWLAATDFEAKADYIRAEVTKLCEKYPLYE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatcaagtaatggaccttattaccagctatgacaaggaagtgggcgaagcgatc
caggccgagtgcgcgcggcagagacggaatctggagctgatcgcttccgagaacatcgta
tccgagccggttatgatggcgatgggcacggtgctgaccaacaaatacgccgagggttat
tccggcaagcgctattacggcggatgtcagtgcgtggacgtggtggagactctggccatc
gagcgcgcgaagaagctcttcggctgcgattacgccaatgtccagccccactccggcgcc
caggccaatatggccgtgttcgtggctatgctgaagcccggcgacaccgtgatggggatg
aacttaaaccatggcggccatctgacccacggaagccctgtgaacttttccggactgtac
tttcatatcgtaccctacggcgtggacgacgagggctatatcgactacgacgagttggag
cgcattgccctggaatccaaacccaagctgatcatagcgggcgccagcgcgtacgccaga
accattgatttcaagcgcttccgcgaggtggcggataaggtgggcgcgtacctgatggtg
gatatggcccacatcgcgggcctggtagcggcgggagagcatcccagccccatcccctac
gccgacgtggtgaccaccaccacccacaagaccctgcgcggacccagaggcggcatgatc
ctggctaacaaggaggcggctgagaagttcaacttcaacaaggccattttcccgggaacc
cagggcggccccttagagcacatcatcgcgggtaaggccgtgtgcttcggcgaggcgtta
aagcctgagttcaaggagtatcagcaccaggtggtgaagaacgcccaggctctggctgct
gccttaaaggagcagggcttcaagattctgaccggcggcacggacaatcatctgatgctg
gtggacctgcggggcatggaggtgtccggcaaggagctgcagaaccgctgcgacgaggtg
tttatcaccctgaacaagaataccgttcccaacgatcccagaagccccttcgtgacctcc
ggcgtgcgcatcggcaccccggccgtcaccaccagagggctgaaggaagaggatatgccc
aagatcgccgagtgcatctggctggccgcaacggacttcgaggccaaggccgattatatc
cgggcagaggtgacaaagctttgcgagaagtacccgctgtatgagtaa
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