KEGG   Clostridium asparagiforme: NQ535_06250
Entry
NQ535_06250       CDS       T08571                                 
Name
(GenBank) helix-turn-helix transcriptional regulator
  KO
K07729  putative transcriptional regulator
Organism
casp  Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:casp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:casp03000]
    NQ535_06250
Transcription factors [BR:casp03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    NQ535_06250
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_19 HTH_25 HTH_26 HTH_24 HTH_23 Sigma70_r4 HTH_37 MarR_2 HTH_11 HTH_Crp_2 Sigma70_r4_2 HTH_38 HTH_28 CENP-B_N Phage_CI_repr HTH_36 HTH_AsnC-type HTH_7 HTH_29 DUF2802 GntR Troponin YdaS_toxin HTH_DeoR GerE MarR TnsD TetR_N HTH_20 YfeC-like Crp MerR HTH_Tnp_ISL3 HTH_17 DUF3949
Other DBs
NCBI-ProteinID: UWO77890
LinkDB
Position
complement(1346160..1346351)
AA seq 63 aa
MKNSIRDKRKQQGLSQEELAKRCGVSRQTVNAIENDKYDPTLALAFHLARELDTRVDELF
TPG
NT seq 192 nt   +upstreamnt  +downstreamnt
atgaaaaattcgattcgggacaagcgaaaacaacaagggttatcgcaggaggagctggct
aaaaggtgcggcgtttcccgccagaccgtaaatgcgatcgaaaacgacaaatacgacccg
accctggccctggcctttcatctggccagagagttagatacaagagtcgacgaacttttt
acgccaggctga

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