Clostridium asparagiforme: NQ535_09995
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Entry
NQ535_09995 CDS
T08571
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
casp
Clostridium asparagiforme
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS
Mg_chelatase
PAS_9
AAA_2
AAA_5
HTH_23
PAS_4
AAA
PAS_8
PAS_10
HTH_50
HTH_7
HTH_Tnp_ISL3
HTH_1
HTH_29
HTH_28
TIP49
HTH_psq
AAA_7
HTH_30
Diguanyl_cycl_sensor
ATPase
Xre-like-HTH
HTH_31
HTH_17
Motif
Other DBs
NCBI-ProteinID:
UWO78583
LinkDB
All DBs
Position
complement(2147625..2149682)
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AA seq
685 aa
AA seq
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MGVRIAIASYGTFEQFIHQIKPFYSEEVEFVILNALFEDLKDEVRRLEKEHSVDVFVGSG
GNGRFLEKYVQETPFVKVKVTGFDFLLALKKAAQYGSSTGLITFGERVPFVSSVKELLNV
EVTERVYHQSSEIDQVLSDLYNQGIEDVIGTAFVLERAALKGMRGHYIWSVDGVKTAVDT
AVQVALAKRQDAKKAHKLASILQTIHEGVIVTDERGTVNEFNTSAEKILKIDRGDVMGRP
VQDVLPNTRLNVVIERQREEYNKIQDVGNVKILTNRCPIFSQGRLIGALATFQNIEEVSE
AEGKIRRKLYTRGFVASTHFEDMQGACAAFQDIVHIGREYAKSGATILISGETGTGKELF
AQSLHNESDRSRMPFVAINCAAVPPNILESELFGYEEGAFTGARRGGKKGVFELAHEGTL
FLDEIGEISMDIQLRFLRALEQREVFRLGGEKVVPVDIRVIAATNKNLWQMVKEGKFRED
LYYRLNVLAIHLPALRDRREDIPLLIRHFLREFRPDLPDEKRLELAQIPFLCAYRWPGNI
RELRNVVERMAVLYKDGMDPERLAAQALSVNEEADEGWAWDVVGGAVAGAAGGAAGAAGV
AGAAAAGAPPTPGSGFCPALPPSPASSLPLSAWILADKQRRERDEILLALRQCGGSRSQA
ARFLGVSRSTLWRKMQALGILVGPE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggggtacggattgcgattgccagctacggcacgtttgagcagtttattcatcagatc
aagcctttttattcggaggaggtggagtttgttatactgaacgccctgttcgaggactta
aaggacgaggtgcggcggctggaaaaggagcactcggtggatgtgtttgtgggcagcggc
ggaaacgggcgttttctggaaaagtacgtgcaggaaacgccttttgtgaaggtcaaggtg
acgggcttcgattttctccttgccctcaaaaaggcggcgcagtacggaagcagcaccggg
cttatcaccttcggcgagcgggtgccctttgtttcctcggtgaaggagctgctgaacgtg
gaggtgacggagcgggtttaccaccagtccagcgagatcgaccaggtattgtctgatctg
tacaaccagggcatcgaggacgtgatcggcacggcttttgtgctggagcgggcggcgctt
aaagggatgcgggggcactatatctggtccgtggacggcgtaaagacagctgtggacact
gcggttcaggtggctctcgccaagcgtcaggacgccaaaaaggcgcacaagcttgccagc
atcctgcaaacaattcatgaaggcgtgatcgttacagacgagcggggcactgtcaatgag
ttcaacaccagcgcggagaagattttgaagatcgaccgcggggacgtgatgggccgcccg
gtccaggacgtgctgcccaacacgcggttgaacgtggtgatcgagcggcaacgggaggag
tacaacaagattcaggacgtggggaacgtgaagattctcaccaaccgctgccccattttc
agccaggggcggctgatcggggctttggccaccttccagaatatcgaggaggtgtccgag
gccgagggaaagatccggcggaagctgtacaccagaggttttgtggcaagtacccatttt
gaagatatgcagggggcctgcgcggcctttcaggatatcgtacacatcggcagggagtac
gccaagagcggcgccaccatcctgatctccggggagacgggcacgggcaaggaactgttc
gcccagagccttcacaacgagagcgaccggagccgtatgccctttgtggccatcaactgc
gcggcagtgccgcccaatatcctggagagcgagctcttcggctacgaggagggggccttc
accggcgccagacgcggcgggaaaaagggcgtgttcgaactggcccacgagggcaccctg
tttctggatgagatcggggagatttccatggacatccagctgcggttcctgcgggctttg
gaacagcgcgaggtattccgcctgggcggcgaaaaggtggttccggtggatatccgggtg
atcgcggccaccaacaagaacctctggcagatggtgaaggaagggaagttccgggaggac
ctgtattaccggctgaacgtcctggcgatccatctgcccgcgctccgggaccgacgggag
gatatcccgttactcatccgccatttcctgagggaattccggcccgacctgccggatgaa
aaacggctggagctggcccaaatccccttcctgtgcgcctaccgctggcccggaaatatc
cgggagctgagaaatgtggtggaacggatggctgttctctataaagacgggatggacccg
gaacggctggccgcgcaggcgttgtccgtgaatgaggaggcggatgaggggtgggcctgg
gatgtggttggcggagctgtagccggagcggccggcggcgcggccggggcggctggggtg
gccggggcggctgccgctggagcacccccgactcccggcagcggtttttgccccgccctg
ccgccctcccccgcctcttccctccccctctccgcctggattctggcggacaaacagcgc
agggagcgggacgagattctcctcgccctgcgccagtgcggcggaagccgctcccaggcc
gcccggtttctgggtgtcagccgctccacgctttggcggaaaatgcaggctctgggcata
ctggtggggccggaatag
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