KEGG   Clostridium asparagiforme: NQ535_10940
Entry
NQ535_10940       CDS       T08571                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
casp  Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:casp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:casp03016]
    NQ535_10940 (truB)
Enzymes [BR:casp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     NQ535_10940 (truB)
Transfer RNA biogenesis [BR:casp03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    NQ535_10940 (truB)
 Prokaryotic type
    NQ535_10940 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 PUA_3 ACP_syn_III
Other DBs
NCBI-ProteinID: UWO78757
LinkDB
Position
2344024..2344932
AA seq 302 aa
MINGLINVYKEPGYTSHDVVARLRGILKQKKIGHTGTLDPAAQGVLPVCLGTATKLCDML
TDRTKTYRAVLLLGRDTDTQDTTGETVFADEAGALALEEERVREAVMGFLGDYDQIPPMY
SALKVDGKKLYELARAGKEVERKARPVTIYELQVESIELPRVVMSVTCSKGTYIRTLCYD
IGRALGCGGCMEQLTRTRVGSFLLEDSLKLDEIEALARAGQIEPYILGVEEVLADYPAIH
AKTEADNLARNGNPLFKNQVQESASPQEGQGFRLYDSGQRFIGIYEYRTDKRWFKPQKMF
LS
NT seq 909 nt   +upstreamnt  +downstreamnt
atgataaacggattgataaacgtatacaaggaaccgggttacacgtcccacgacgttgtg
gcccggctccgcggcattttaaaacagaaaaagatcgggcacacggggactctggatccg
gccgctcagggcgtgcttccggtatgcctggggaccgcaacaaagctctgcgacatgctg
acggaccggaccaagacctatcgggccgtgctgcttctgggacgggacaccgacacccag
gacaccacgggggagacggtgtttgcggacgaggccggggcgctggcccttgaggaagag
cgggtccgggaggccgtcatgggctttctgggcgattatgaccagattccgcccatgtac
tccgccctgaaggtggacggcaaaaagctctacgagctggccagagccggaaaggaagtg
gagcgcaaggcgcgcccggttacgatctacgaacttcaggtggagtccatagagcttccg
cgggtggtgatgtccgtcacctgctccaaaggcacttacatccgcacgctctgctatgat
atcggcagagcgctgggctgcgggggctgcatggaacagctgaccagaaccagggtggga
agctttttgctggaggacagcctgaagctggacgagatcgaggctctggccagggccgga
cagattgagccctatattctgggagtggaagaggtgctggcggactatccggccatccat
gccaaaacggaggcggataacctggcccgaaacggcaacccgctgtttaaaaaccaggtg
caggagagcgccagccctcaggaggggcagggctttcgcctgtacgacagcgggcagcgc
tttatcggaatatacgagtaccggacggacaagcgctggttcaagccccagaagatgttc
ctgtcttaa

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