Clostridium asparagiforme: NQ535_11515
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Entry
NQ535_11515 CDS
T08571
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
casp
Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
casp03000
]
NQ535_11515
Transcription factors [BR:
casp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NQ535_11515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
TetR_N
HTH_Crp_2
HTH_IclR
HTH_10
MarR_2
HTH_24
HTH_31
HTH_7
HTH_19
Sigma70_r4
Acetyltransf_3
HTH_26
Sigma54_DBD
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UWO78867
LinkDB
All DBs
Position
2479623..2480609
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AA seq
328 aa
AA seq
DB search
MPRKITMADIADMAGVTKSTVSRYFNGGYVKESTRERIQEITREYNYEPNAFARLKARES
NVIGVVVPTLNSKVTSRVVTSIGRYLRGQGYETLIKDSDHSPELELKNMQRLMTLNVDGI
LVSAITITPELREAIESCPVPVVVLAQEYPQGTVVVADDYGAGRAMGAYVGRTGPRRVGY
LGVEESDLAVGISRRQGVLDGLREQGDPEVVALQGDYSYESGQRMAEAILAEGPVDAMIC
ATDRLAFGAYLVLERHGLRVPEDVSVAGFGGYDESALLKPPLTTLKFDSYAMGYLGAETV
LKMIRGEPVPKKQIVDYAFIEGKSVRER
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaaaaatcaccatggccgatattgccgacatggcgggagtgaccaagagcacg
gtgtcccgctattttaacggaggatatgtgaaggagtccaccagggagcggattcaggag
atcacgcgggagtacaactacgaacccaatgcgtttgcgcgcctgaaggccagggagagc
aatgtgatcggggtggtggtgcccactctgaactccaaggtgaccagccgggtcgtcacc
agcatcggccggtatctgcgggggcaggggtatgagacgctgatcaaggattcggaccac
agcccggagctggagctgaaaaatatgcagcggctgatgacgctgaacgtggacggcatc
ctggtcagcgccatcaccatcacgccggagctgcgggaagccattgagagctgcccggtg
ccggtggtggtcctggctcaggaatacccacagggaacggtggtggtggccgacgactac
ggcgccggcagggctatgggcgcttacgtggggcggaccggcccgaggcgggtgggctat
ctgggagtggaggagtctgacctggcggtgggaatcagccgccggcagggagttttggac
ggattgcgggagcagggcgatccggaggtagtcgcgcttcagggggattacagctatgag
agcggacagcgcatggccgaggcgatcctggcggaaggtccggtggacgccatgatctgc
gcaacggaccgcctggcgttcggcgcatatcttgtgctggagcggcacggcctgcgggtg
ccggaggacgtgtcggtggccgggttcggaggctatgacgaaagcgcgctgttaaagcct
ccgctgaccacgctgaaatttgactcctacgccatgggttatctgggagcagagaccgta
ttgaagatgatccgtggggaaccggtgccaaaaaagcagattgtggattacgcgtttatt
gagggtaaaagtgtgagggagaggtag
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