Clostridium asparagiforme: NQ535_12425
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Entry
NQ535_12425 CDS
T08571
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
casp
Clostridium asparagiforme
Pathway
casp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NQ535_12425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
casp02000
]
NQ535_12425
Transporters [BR:
casp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NQ535_12425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_25
AAA_22
AAA_21
AAA_29
RsgA_GTPase
AAA_16
AAA_10
AAA_15
AAA_5
AAA_33
AAA_23
AAA_26
NACHT
nSTAND3
DUF87
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
UWO79040
LinkDB
All DBs
Position
complement(2683370..2685121)
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AA seq
583 aa
AA seq
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MFQKVLRYTGRHRKTTYASILVLVAGVAMSVLPYFFLYRLLRPLLTGGSLTLEETLLNAG
AMALCMVLYGLLYVEGLALSHRSAYHTLENLRLHLQSKLEKQPLGAIQEKGVGVWKKMFI
DDIESMELLLAHALPEGLSNLAVPVVVFVAMFLTDWKLGLLSLCSLPLGVLAMGMMYRSG
MSKMGDYYAAGQKMNNTIVEYINGMEVVKVFNRDGESYHRFETDVKNYRDFTLDWFRACW
LWMALYTSILPCVALVLLPVGGYLVLTGASTLPDYALVLCMSFSVGPPLIRAMNFMSVLP
QLSYKIDQMESLFNIPPLKEGKTHFNGNDLQIRFENVRFSYEKDEVLHGISFSVPQGSLT
ALVGESGSGKSTLAKLLVHFYDVTDGRITLGGQDLREMSLASLNEQISFVAQEQFLFNTS
LLENIRLGRPGATDEEVLAAAERAQCGEFLKRLEKGIYTMAGDGGKGLSGGERQRIALAR
AILKDAPIVVLDEATAFLDPENEEKMNAAIAEVIRGKTVIVIAHRLQSIVGADQIVVLDQ
GKVAGIGRHDTLRKTCSAYEKLWRAAEGAAAWRVSAEKGGDEA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgtttcaaaaagtcctgcgctacaccggacgccaccggaagacgacttatgcctccatt
ctggtactggtggccggcgtggccatgagcgtgctgccctatttcttcctctaccgcctg
ctgcggcccctgctgactgggggcagtctcactttggaggagaccctgttaaacgccggg
gccatggctctatgcatggtcctctacggccttctttatgtggaggggctggcactgtct
catcgctccgcctatcatacgctggaaaacctccggctccatctccagagcaagctggaa
aagcagcccctgggcgcgatccaggagaagggcgttggagtttggaagaagatgttcatt
gacgacatcgagagcatggaacttctgctggcccacgccctgccggaagggctgtccaat
ctggcggtgccggtggtggtatttgtggccatgttcctcacggactggaagcttggtctg
ctttccctctgctccctcccgctgggcgtgctggctatgggcatgatgtaccgctccggc
atgagcaagatgggagactactacgccgccgggcagaaaatgaacaacaccatcgtggag
tacatcaacggcatggaagtcgtgaaagtcttcaaccgggacggagagtcctatcaccgc
tttgagaccgatgtaaaaaactaccgtgattttactctggattggttccgggcctgctgg
ctgtggatggccctctacaccagcattttgccctgcgtggcgctggtgctgctgccggtc
ggcggctatctggtactcaccggcgcctctaccttgccggattacgcgctggtattgtgc
atgtctttttccgtgggaccgcctctgatccgagccatgaactttatgtcggtgctgccc
cagctgagctacaagatcgaccaaatggaatctctgttcaatattccgcccctgaaagaa
ggaaaaacgcatttcaacggaaacgatttgcagatccgctttgagaatgtgcggttttct
tatgaaaaggacgaagtcctccacggcatctccttctctgtcccacaggggagcctcact
gctttggtgggagaatccggcagcgggaaatcgacccttgccaagctgctggtccacttt
tacgatgtgacggacggacgcatcacgctgggggggcaagacctgcgagagatgtccctc
gcctctctgaatgagcagatctccttcgtcgcgcaggagcagttcctgttcaacaccagc
ctgttggagaacatccggctgggaagacccggtgccaccgacgaggaggtgctggcggcg
gcggaacgggctcaatgcggagaatttctgaaacggctggaaaaaggaatctataccatg
gccggcgatggcggcaaagggctttccggcggcgagcggcagcggatcgccctggcccgg
gcgattctgaaggacgctcccatcgtggtgctggacgaggccaccgcttttttggacccg
gagaatgaggagaaaatgaacgccgccattgccgaggtgatccggggcaagacggtcatc
gtcatcgcccaccggcttcagtccattgtaggcgccgatcagattgtggtgctggatcaa
ggaaaggtggcagggatcggccgccacgatacattgcgaaagacctgttccgcctatgaa
aaattgtggcgggctgctgagggagccgctgcctggcgtgtctccgcggagaaaggaggc
gacgaagcatga
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