Clostridium asparagiforme: NQ535_12505
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Entry
NQ535_12505 CDS
T08571
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
casp
Clostridium asparagiforme
Pathway
casp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NQ535_12505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
casp02000
]
NQ535_12505
Transporters [BR:
casp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NQ535_12505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_25
AAA_29
AAA
Cytidylate_kin
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UWO79054
LinkDB
All DBs
Position
2700308..2702104
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AA seq
598 aa
AA seq
DB search
MSHHALFFERSGFVKQRSWLAILLSFAGPCRGKLVLSVICAIISVVGGFVPYLGVYEILR
LFIHQSASGTELLRWAGVCLAGYTVKVAFYAFSTMLAHVSAYTILEGLRRQVAHKLMHAP
LGSVLSKPVGSLKSTIVDRIEDIEPPLAHMIPELSSNVLLPIVVVIALFAMDWRMGLASL
ATIPAALIPMAASLRTYNEKYAAYMAANAQVNSIIVEYVEGIEVVKAFNQSGASYEKFVR
AVTSFRDFTLDWFRCTWKSMNLCLSILPTTLLATLPVGIALYQTGVLDPARLALCLMLVL
GIVSPLVQAAAFLNSMKSMEFAVRDTRHLLDLEELPEASEPARLSGSGITLRDVSFSYSG
KEEDTVLRHIDLELPAGTFTALVGPSGGGKSTAARLIARFWDVTDGCIAIGGVDIRNLTL
KQLTDQVSFVTQDNFLFDCSLKENIRLGKPDATEEEVWAAARAAQCEEFLGRLEHGWDTP
AGEAGKQLSGGERQRIAIARAILKDAPIVILDEATAFTDPENEDKIQRSLMALSRGKTLL
VIAHRLSTIQNADQIVVLEKGRIVDKGTQPELLSRCPLYQKLWQAHVGAQNWAVGKEA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccatgccctattttttgaaaggagtggttttgtgaaacaacgcagctggctg
gccatcctgctctcctttgccggtccctgccggggaaagctggtcttgtctgttatatgc
gcaattatcagcgtggtggggggctttgtgccgtatctgggggtctatgagatccttcgc
ctgtttatccatcagtcggcctccggaacggagcttctccgatgggctggagtgtgtctg
gcgggatatacggtcaaggtggctttttacgccttttctactatgctggctcatgtgtct
gcctacaccattttggagggcctgcgccgtcaagtggcccataagctgatgcacgccccc
ttggggagtgtgctgtcgaagcccgtcggttccctcaaaagcaccatcgtggatcggatc
gaggacattgagccgccgctggcccacatgataccggaattgagttccaatgtgctgctg
cctatcgtggtggtgatcgccctctttgccatggattggcggatgggccttgcctccctt
gctacgattccggccgcgctgatccccatggcggcgagcctgcggacctacaacgaaaag
tatgccgcctatatggcagccaatgctcaggtcaacagtatcatcgtggagtatgtagag
ggcatcgaggtggtaaaggctttcaaccagagcggtgcctcctatgagaaattcgtccgg
gcagtgaccagtttccgtgacttcacgctggattggttccgctgcacctggaagtccatg
aacctgtgcctgtctatcctgcctaccacgctgctggccaccctgccagttgggatcgcc
ctgtatcagaccggcgtcctggacccggcccggctggctctgtgcttgatgctggtgctg
ggtatcgtgtccccgctggtgcaggctgcagcctttctcaattccatgaagagcatggaa
tttgccgtccgggacactcggcatctgctggatctggaggagctgcccgaggcgtccgag
cccgcccgcctctccggcagcggtatcactttgcgggatgtgtccttctcgtatagcggg
aaagaagaggacactgtgctgcgtcacattgatttggaacttcccgccggcaccttcacc
gctctggtgggtccctccggtggcggcaaatctacagcagcccggcttatcgctcggttc
tgggatgtgacggatggctgcattgccataggcggtgtggatattcggaatctcacactg
aagcagctgacggatcaggtcagtttcgtgacacaggacaatttcctctttgactgctct
ctgaaagaaaacattcgattggggaagccggacgccacggaggaggaagtttgggcggct
gcccgggctgctcagtgtgaggagtttttaggacggctggagcatggatgggatacccca
gcgggtgaagcgggcaagcagctctccggtggggagcggcagcggatcgccatcgcccgc
gcgattctgaaggacgcccccattgtcattctggacgaggccaccgcctttaccgatcca
gagaatgaggacaagatccagcgttccctgatggcgctctcccgagggaaaacgctgctg
gttattgcccaccggctgagcacgattcagaacgccgaccagatcgtggtgctggagaaa
ggccgtattgtggacaaaggcacacagccggagttgctcagccgatgcccgctatatcaa
aagctatggcaggcccatgtgggtgcccagaattgggcagttggaaaggaggcttga
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