Clostridium asparagiforme: NQ535_12570
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Entry
NQ535_12570 CDS
T08571
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
casp
Clostridium asparagiforme
Pathway
casp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NQ535_12570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
casp02000
]
NQ535_12570
Transporters [BR:
casp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NQ535_12570
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_30
AAA
RsgA_GTPase
AAA_25
AAA_29
NACHT
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UWO79067
LinkDB
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Position
2712539..2714269
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AA seq
576 aa
AA seq
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MFSVLRKISAFAGSRRGLLKKSMLVAFLGAVFTAFQFWALMLTLEILVAGASLSIWPVIG
VMLVSVAGRTACSYWSTNAETETGYFMVAEKRIHIGDRLRYIPMGYFNDNSLGNITAVVT
TTLGDVENNAARCLVSVIGGFLNTLAMSLAILLVDWRLGLLAIGGILAYLLVAELSQRSL
FKTGPARQRAQMKLVEAVLEYIQGMSVVKAYGLDKDSGQAVQKTVDESCEKALGLERSVV
PWMGARQITVRVFAVALAVCALALYSEGSLPLTRCLLMLVASFMLYAELESAGNMADNLQ
MLGASMDKANSIDDTPVMDIDGAELCPEDASVRFEDVSFSYGERTILDHVSLTVPTGSTT
AVVGPSGGGKTTLCNLIARFWDVQGGRITVGGHDVREYKLDSLMKNISMVFQSVYLFNDT
VENNIKFGRPTATHEQVVAAAKAACCHDFITALPDGYDTVLGEGGGSLSGGEKQRISIAR
AMLKDAPIVILDEATASVDPENEAELQAAISSLTKGKTLILIAHRLKTVRNADQILVLNG
GHIVQRGTHEELIAQPGLYADFVYVRAKANSWKLEA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgtacttcggaaaatttccgcttttgcaggcagccgcagaggtcttttaaaa
aaatctatgctcgtggctttcctgggagctgtgttcaccgcgttccagttctgggccttg
atgctgaccttggagatcctggtggccggcgcgagcttgagcatatggccggtgatcggc
gtcatgctggtctctgtggcaggacggaccgcctgctcctactggtccaccaatgcggag
acagagacaggctatttcatggtggcggaaaagaggattcatatcggagaccggctgcgc
tatatccccatgggctacttcaatgacaactccttgggcaacattaccgccgtagtcacc
accacactgggagatgtggagaataacgccgcccgctgcctggtcagtgtcatcggcggg
ttcctcaacactctggccatgagtcttgcaatcctgcttgtagactggcggctcggcctg
ctggctatcggggggattcttgcctatctgctggttgcggaactgagccagcggtctctg
ttcaagacggggcctgcccgccagcgcgcccagatgaagctggtggaggcggtactggag
tacatccagggcatgagtgtggtaaaggcttacggcttggataaggacagcggccaggct
gtgcaaaaaaccgtggatgaaagctgtgaaaaggccttggggctggaacgctccgtagtc
ccctggatgggggcgcggcagatcacagtgcgcgtatttgccgtggcgctggccgtgtgc
gccctggcactctattccgaagggagcctgcctctgacacggtgcctgctgatgcttgtt
gcctctttcatgctttacgcggagctggagagcgccgggaatatggcggacaatctccag
atgctgggtgcctctatggataaggccaattccatcgatgatacgccggtgatggatatt
gacggagcggaactttgtccagaggatgcttctgtccggtttgaggatgtctctttttcc
tatggggagcggaccattctggatcatgtgagccttacagtccccaccggcagcaccacc
gccgtggtaggcccctccggcggcggcaagaccactctgtgtaatcttatcgcccgcttc
tgggatgtccagggcggaaggatcaccgtgggcggccatgatgtgcgggagtacaagctg
gacagcctgatgaagaacatttccatggtgttccagtcggtgtatcttttcaacgatacc
gtggagaacaacatcaagtttggtcgcccgacggccacccatgaacaggtggtggccgcc
gccaaagccgcctgctgccacgatttcatcacggctctgccggatggctacgacacagtt
ttgggagagggcggcggttctctctccgggggcgagaaacagcgtatctccatcgcccgg
gccatgctcaaggatgcgcccatcgtaattctggacgaggccacggccagtgtagacccg
gagaacgaagcggaactccaggccgcgatctcctctctgacaaaggggaaaaccctgatc
ctgatcgcccaccggctgaaaacggtgcgtaatgccgaccagatcctggttctcaatggc
gggcacattgtccagcggggtactcatgaggaactgatcgcccaaccgggcctatatgcc
gacttcgtatatgtccgggccaaggccaacagctggaagctggaggcttga
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