Clostridium asparagiforme: NQ535_14785
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Entry
NQ535_14785 CDS
T08571
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
casp
Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
casp03009
]
NQ535_14785 (rimO)
Enzymes [BR:
casp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NQ535_14785 (rimO)
Ribosome biogenesis [BR:
casp03009
]
Prokaryotic type
ribosomal protein modification factors
NQ535_14785 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
UWO74121
LinkDB
All DBs
Position
3178184..3179539
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AA seq
451 aa
AA seq
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MEKIKLFCVSLGCDKNLVDTEKMLGLLNREGYAFTDDEGEADAILINTCCFIGDAKEESV
NTILEMARLKEEGRCRALVVAGCLAQRYKEEILEEIPEVDGILGTTSCDEIVNVLNGILG
REKPAPVSCFHDLAEPPTGGENRVVTTGGYYAHLKIAEGCDKRCTYCIIPYLRGSFRSVP
MEQLVREAGQLAEQGVKELILVAQETTLYGKDLYGEKALPKLLHELAKVPGIQWIRLQYC
YPEEITDELIEAIRTEEKVCHYLDIPIQHASDGILRRMGRRTNQAQLREMIARLRREIPD
IALRTTLISGFPGETQEDHEELMAFVDEMEFERLGVFAYSAEEDTPAYSFPDQVPQEVKE
DRRDEIMQLQQEIAFEKSEAMVGRVLTVLIEGKVVDEPAYVGRTYMDAPSVDGLIFVNAD
VELMSGDFVRVRVTGSAEYDLIGEIYDESAQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaataaaactgttttgcgtttccctgggctgcgacaagaacctggtggacacg
gagaaaatgctgggtctcttaaatcgcgagggatacgcgtttacggacgacgagggggag
gctgacgccatcctgatcaacacctgctgtttcatcggagatgccaaggaggagagcgtt
aacaccatcctggagatggcccggctgaaggaggaaggccggtgcagggccctggtggtg
gcgggctgcctggcccagcgctacaaagaagagattctggaggagattcccgaggtggac
ggaattctgggcaccacctcctgcgatgagatcgtgaacgtgttaaacggcattctggga
cgggaaaagccagcgccggtgtcgtgtttccacgatctggccgaaccgcccaccggcgga
gagaaccgggtggtcaccaccggcggctattacgcacatctaaagatcgccgagggctgc
gacaagcgctgtacttactgtatcatcccctatttgcgcggatcgttccgcagcgttccc
atggaacagctggtgcgggaggccggacagctggctgagcagggggtgaaggagctgatt
ctggtggcccaggagaccacgctctatggaaaggatctttacggtgagaaagctctgccg
aagctgctgcacgagctggccaaggtgccggggatccagtggatccgccttcagtactgt
tacccggaggagatcacagacgagctgatcgaggcgatccggacggaggaaaaggtctgc
cactatctggacatccccatccagcacgccagcgacgggattctgcggcgcatggggcgc
aggaccaaccaggcccagctgcgggagatgatcgcaagacttcgccgggagatacccgat
attgcgcttcggaccaccctgatctcaggctttcccggggagacccaggaggatcacgag
gagctcatggcctttgtggatgagatggaatttgagcggctgggcgttttcgcctactcg
gcggaggaggacacgccggcttactcgttcccggaccaggttcctcaggaggtcaaggag
gaccgcagggacgagatcatgcagctgcagcaggagatcgcctttgagaaatccgaggct
atggtgggccgggtgctcaccgtgctgatcgagggtaaggttgtggatgagccggcctac
gtagggcggacctatatggatgcgccgagcgtggacggactgattttcgtgaatgcggat
gtggaactgatgagcggggattttgtgcgcgtcagggtgaccggttccgcggagtatgat
ctgataggagagatatacgatgaatctgcccaataa
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