Clostridium asparagiforme: NQ535_14925
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Entry
NQ535_14925 CDS
T08571
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
casp
Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
casp03009
]
NQ535_14925
Enzymes [BR:
casp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
NQ535_14925
Ribosome biogenesis [BR:
casp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NQ535_14925
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SHOCT-like_DUF2089-C
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UWO74147
LinkDB
All DBs
Position
3203858..3204601
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AA seq
247 aa
AA seq
DB search
MAERKKAMIRLDKFLTEMGRGTRSQVKEMVRKGRITVNGQAVRQADLKINPEADQICLDG
AAVAYARTEYYMLNKPQGVVSATEDGRYQTVTELITGALRGDIFPVGRLDIDTEGLLLLT
NDGSLAHNLLSPRKHVDKVYFARIEGQLPEDAVGRAAAGLVLEDGTKTLPARLEILEPGQ
VRLTIREGKFHQVKRMFEAMGCRVTYLKRLSMGPLVLDPALAPGEYRPLTEQEIQDLQGC
QTGQKQV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggaagaaggcaatgattcggcttgataaatttttaacggaaatggggcgg
ggcacccgcagccaggtcaaggagatggtccgcaagggcagaataacggtgaacggtcag
gcggtccgccaggcggatttgaaaatcaaccccgaggcggatcaaatctgcctggacgga
gcggcggtagcttacgcccgcacggagtattacatgctcaataaaccccagggggtggtt
tccgccaccgaggacgggcgctaccagaccgtgacggagttgatcaccggggcgctgcgg
ggagacatttttccggtggggcggctggatatcgacaccgaggggttgctgcttctaacc
aatgacgggtccctggcccacaatctgttgtcgcccaggaagcatgtggacaaggtgtat
tttgcacgcatcgaaggtcagcttccggaggacgccgtcgggcgtgcggcggccggcctg
gtgctggaggacggcacgaaaacccttccggcccggctggaaatcctggaacccggccag
gtgcgtctgaccatacgggagggcaaattccatcaggtcaagcgtatgttcgaagccatg
ggctgccgtgtgacctatttaaaacgtttgtccatggggccgctggttctggacccggcg
ctggctccgggggagtaccggccgcttaccgagcaggaaatccaggatcttcagggttgt
cagacggggcaaaagcaagtataa
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integrated database retrieval system
