Clostridium asparagiforme: NQ535_15435
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Entry
NQ535_15435 CDS
T08571
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
casp
Clostridium asparagiforme
Pathway
casp03030
DNA replication
casp03410
Base excision repair
casp03420
Nucleotide excision repair
casp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ535_15435 (polA)
03410 Base excision repair
NQ535_15435 (polA)
03420 Nucleotide excision repair
NQ535_15435 (polA)
03440 Homologous recombination
NQ535_15435 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
casp03032
]
NQ535_15435 (polA)
03400 DNA repair and recombination proteins [BR:
casp03400
]
NQ535_15435 (polA)
Enzymes [BR:
casp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQ535_15435 (polA)
DNA replication proteins [BR:
casp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NQ535_15435 (polA)
DNA repair and recombination proteins [BR:
casp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NQ535_15435 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ535_15435 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UWO74241
LinkDB
All DBs
Position
3318206..3320959
Genome browser
AA seq
917 aa
AA seq
DB search
MDKLVLIDGHSILNRAFYGVPDLTNSEGLHTNAVYGFLNIMFKILEEEKADHLAVAFDLK
EPTFRHQMYEAYKGTRKPMPEELHEQVALMKEVLTAMGVPILTLPGYEADDILGTVAKRS
QKEGIQVSVVSGDRDLLQLADEHIKIRIPKTSRGGTEVHDYYPEDVKREYQVTPAEFIDV
KALMGDSSDNIPGVPSIGEKTATAIISAYGSIENAYAHLEEIRPPRAKKALEEHYDMAQM
SKELATICLDCPVAFEYGKTQIENLYTPEAYQYMKRLEFKSILTRFDAASMGGGETSSLE
DGFRLVTEKAEAERLFAKAAKQPVVGVQLITASRSAARAAGEMEQLSFSFDEGGALQSGE
KAKEGLLPVAAAALCAGEEDICCIVTGGELTEVWLLERISALLQGLTGGAGAWVLDLKEQ
LPYLDIPYDGPVFDAGVAGYLLNPLKDSYGYDDLARDFLGLTVPSRADLLGKQSLGDALW
MKDPKAVSCACYMGYVAMKAAAPLTERLKQTGMYQLFIEIEMPLIYSLSSMEQAGVKVER
EELKEYGSRLKVQIDVLEQEIYRDTGKEFNINSPKQLGEILFGDMALPGGKKTKTGYSTA
ADVLEKLAPDYPVVQKILDYRQLTKLYSTYAEGLAAFIGSDGRIHGKFNQTITATGRISS
TEPNLQNIPVRMELGREIRKVFVPREGSVFVDADYSQIELRILAHMSGDDRLIGAYRSAQ
DIHAITASEVFHIPLDQVTPLQRRNAKAVNFGIVYGISAFGLSEDLSISRKEAVEYINKY
FETYPGVKTFLDGLVTQGKEQGYVTTLYGRRRPIPELKSANFMQRQFGERVAMNSPIQGT
AADVMKIAMIRVDRELKKRNMKSRIVLQIHDELLVETERSEVEAVKALLEEQMKGAADLK
VALEVDAKVGDSWFAAK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacttgttttaatcgacggacacagtatcttaaaccgcgcattttacggggta
ccggacctgaccaactcggagggtctgcataccaacgcagtgtacggttttttaaatatc
atgtttaaaattctcgaggaggagaaggcggatcacctggcggtggcctttgacctgaag
gagcccaccttccggcaccagatgtacgaagcctacaagggcacgcgcaagcccatgccc
gaggagctccacgagcaggtggcgctgatgaaggaggtgcttacggccatgggcgtgccg
attctgacgctgccgggttatgaggcggacgacattctgggcaccgtggccaagcgcagc
cagaaggagggcatccaggtgtccgttgtctccggggaccgggacctgctgcagctggcg
gacgagcacatcaaaatccgcatccccaagaccagcagaggcggtacggaggtccacgac
tattacccggaggacgtgaaacgggagtaccaggtgacgcccgcagagttcatcgatgtg
aaagccctgatgggggattcctcggacaatattcccggcgttccgtccatcggtgaaaag
acggccacagccatcataagcgcttacggcagcattgaaaacgcttacgcgcatctggaa
gagatccgtccgcccagggcgaaaaaagctctggaggagcactacgacatggcgcagatg
agcaaggaattggccaccatctgtctggactgcccggtggcattcgaatacgggaaaacg
cagatcgaaaacctctacacgccggaggcgtaccagtacatgaagcggctggagttcaag
tccattctcacccgctttgacgccgcttccatgggaggaggggagacctccagccttgag
gacggcttccgtctggtgacggagaaggcggaggcggaaaggctgtttgcaaaggccgca
aagcagccggtggtgggcgtacagctgatcaccgccagccgcagcgcagccagggcagcg
ggagagatggagcagctctcgttttcctttgacgagggcggcgcgctacagtccggcgaa
aaggccaaggagggccttttacccgtagccgccgcagcgctgtgcgccggggaggaagat
atctgctgtattgtcaccggcggggagctcaccgaggtgtggctgttggaacggatatcc
gcactgctgcagggcttgaccggcggagcgggcgcctgggtgctggatttaaaagaacag
ctgccctatctggatatcccctacgatggcccggtgtttgacgcaggggtggcgggatac
ctgttaaatcccctgaaggactcctacgggtacgacgatcttgcaagggacttccttgga
cttaccgtgccctccagggcggacctgctgggcaaacagtccttgggcgacgccctttgg
atgaaggaccccaaggctgtcagctgcgcctgctatatggggtatgtggccatgaaggcg
gccgcgcctctgaccgagcgtctgaaacaaaccggtatgtaccagctgttcattgaaatc
gagatgccgctgatctacagcctttccagtatggaacaggccggcgtgaaggtggagcgg
gaggagctaaaggagtacggaagccgcctgaaggtgcagatcgacgtgctggagcaggag
atctaccgcgacacgggcaaggaattcaacatcaattcccccaagcagctgggcgaaatc
cttttcggagatatggcgctgcccggcggcaaaaagaccaagaccggctattccaccgct
gcggacgtgctggagaagctggccccggactatccggtggttcagaagattttggactat
cgccagctgaccaagctctattccacctacgcggaagggctggcggcgttcattggctcg
gacggccgcattcacggcaaattcaaccagaccatcacggccaccggccgcatcagcagt
acggagccgaatttacagaatattccggtgcgcatggagctggggcgggagatccgcaag
gtctttgtgcccagagagggaagtgtgtttgtggatgcggactactcccagatcgagctg
cgcatcctggcccacatgtcgggggacgaccggctgatcggggcctaccgctccgctcag
gatatccacgccatcacggcctcggaggtgtttcacattcccttagaccaggtgacgccc
ctgcagcggcgcaacgccaaggctgtgaacttcggtatcgtctacggcatcagcgcattc
ggactcagcgaggatttgagcatttcccgcaaggaggcagtggagtatatcaacaaatat
tttgagacctatccgggcgtcaagacctttctggacggactggtgacccagggcaaggaa
caggggtatgtgaccaccctctacggccgcaggcgtcccattccggagctgaaatccgcc
aacttcatgcagcgccagttcggcgagcgcgtggcgatgaattcccctatccagggcact
gcggcggacgtgatgaagatcgccatgatccgggtggaccgggagttaaaaaagcggaac
atgaagtccagaatcgtgctgcagatccacgatgagcttttggtggagaccgagcgcagc
gaggtggaggcggtgaaagccctgctggaggaacagatgaagggggccgcggatttgaag
gtagccctggaggtggacgccaaggtgggcgattcctggtttgcagctaaataa
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