Clostridium asparagiforme: NQ535_15680
Help
Entry
NQ535_15680 CDS
T08571
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
Organism
casp
Clostridium asparagiforme
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
CCDC39
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UWO74287
LinkDB
All DBs
Position
3385262..3388822
Genome browser
AA seq
1186 aa
AA seq
DB search
MYLKSIEIQGFKSFANKLVFEFHNGITGIVGPNGSGKSNVADAVRWVLGEQRIKQLRGAS
MQDVIFSGTELRKPQGFAYVAITLDNGDHQLAIDYDQVTVSRRLYRSGESEYMINGSACR
LKDINELFYDTGIGKEGYSIIGQGQIDKILSGKPEERRELFDEAAGIVKFKRRKAIAQKK
LEDEQASLIRVNDILTELEKQVGPLERQSKAAREYLQLKETLKVCDANQFLMETEGIRRQ
LAEVAEKEKILTGDLEHTRRESDTLKEEYDRLEAALAQEDALMAGNRDELNRCTVENSSL
EGRIGVLNEQIRTEEMNEAHIGSRREAISRDLESRKTQLAGYEEQKAQMDVQADAMAGRL
DEAARLLESRDELIHRLEQEIESEKSAIINALNERAGLTARSQRYETMMEQVDLRRSEVT
QKLLKFKSDESVQEEQIRQEEDALSAVERRIAESQEKSAQTEEELNQADQELRRLNRNLN
DTQQQYHMSYTKLESLRNLAERYDGYGGSIRRVMEVRDRIRGIHGVVADLIHVPQKYEVA
IETALGGSIQNIVTDSEETAKRLIEYLKKNKYGRATFLPLTAIGGRQTFSQESALKEPGV
LGLASQLVEAEKQYDGLIRYLLGRVVVTDTIEHAIALARKYKYSLRIVTLEGELLSAGGS
MTGGAFKNTSNLLGRRREIEELEEACKKALTQVETTQGDLNIQEGILQEKKEELEAVRSA
IQKLYLEQNTLRMNLAQLEEKKAEIAGSYVDLERERGQLDEQVREISGSQAALKQETAAL
EEKNTLSGQAVEEKTAALEEAKTSRETCAAELAQIQVEAAELKQKLDFLQENVDRVRAEM
RKLTAEYRDLEAGDRNAQGIIEARRQEIAALKEKIAGIAVHTKELEERLTAQTAKKEEMA
GRQKGFFIRREELSARMSDLDKDMFRLQAQQEKLEERLEHSTTYMWNEYEMTFSSAEALR
DEAYGSLSEVRRQIDDLKGRIKALGNVNVNAIEDYREVSERYEFMKTQHEDLVAAQAELE
KIIVELDTGMRRQFQEKFGEIRAEFDKVFKELFGGGRGALELMEDEDILEAGIQIIAQPP
GKKLQNMMQLSGGEKALTAISLLFAIQNLKPSPFCLLDEIEAALDDSNVDRFAGYLHKLT
RNTQFIVITHRRGTMVSADRLYGITMQEKGVSTLVSVNLIEDDLDK
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaaaaagtatcgaaatccagggttttaaatcctttgcgaacaagctggtgttt
gagttccacaacggaatcaccggcattgtgggccccaacggcagcggaaagagcaatgtg
gccgacgcggtgcgctgggtgctgggcgaacagcgcatcaagcagctgcgaggcgccagc
atgcaggacgtaatcttttccggcacggagctgcgcaagccccaggggttcgcctacgtg
gccatcaccctggataacggggatcatcagctggccatcgactacgaccaggtgacggtt
tcccgccgcctttaccgctccggcgagagcgagtatatgataaacggcagcgcctgccgt
ttaaaggatatcaacgagctattttacgacaccggcatcggcaaggagggctactccatc
atcggccagggccagatcgacaaaatcttaagcggcaagccggaggagcgcagggaactg
ttcgacgaggcggcgggcattgtgaagttcaaacggcgcaaggccatcgcccagaagaag
ctggaggacgagcaggccagcctgatccgcgtaaacgacattctcactgagttagagaag
caggtaggccccctggagcgccagtccaaagccgccagggagtatctgcagctgaaagag
accttaaaggtctgcgatgccaaccaattcctgatggagacggaggggatccgcagacag
ctggccgaggtggcggagaaggagaaaattctcaccggcgatttggaacacacccgtcgg
gaatccgacaccctgaaggaggagtacgaccgcctggaagccgccctggctcaggaggac
gctctcatggccgggaaccgggacgagttgaaccgctgcacggtggagaacagcagcctg
gaaggccgcatcggcgtgctgaacgagcagatccgcaccgaggagatgaacgaggcccac
ataggcagccgtcgggaggccatttccagggatctggagtcccggaaaacccagctggcc
ggatatgaggagcagaaggcgcagatggacgtccaggccgacgccatggccgggcggctg
gacgaggcggcccgcctcctggagtcccgggacgaactgattcaccgcctggagcaggag
atcgagtcggagaaatcggccatcataaacgccttaaacgagcgggcgggcttaaccgcc
cgcagccagcgctacgagaccatgatggagcaggtggatttgcggcgcagcgaggtgacc
cagaagcttctgaaattcaagagcgacgaatccgttcaggaggaacagatccgccaggag
gaggacgccttaagcgcggtggagcggcgcatcgccgagagccaggagaaatccgcccag
accgaggaggagttaaatcaggcggaccaggagcttcgccgtttaaaccgcaatttaaac
gacacccagcagcaataccacatgtcctacaccaagctggaaagcctgcgcaacctggcc
gagcgctacgacggctacggcggcagcatccggcgggtcatggaggtgcgggaccgcatc
cgtgggatccacggcgtggtagcggacttaattcatgtgccccagaagtacgaggtggcc
attgaaaccgctctgggcggcagcatccagaacattgtcacggattccgaggagacggcc
aagcgcctgatcgaatacttaaaaaagaataaatacggccgggcaacctttctgcccctg
accgccatcggtggccggcagaccttttcccaggagagcgccttaaaagaacctggcgtg
cttgggctggccagccagctggtggaggcggaaaaacagtacgacggcctgatccgctat
ctcttagggcgggtagtggtgacggataccattgagcacgccatcgctctggccagaaag
tacaaatacagcctgcgcatcgtcaccctggagggcgagcttttgagcgcgggcggctcc
atgacgggcggcgcattcaagaacaccagcaacctgctgggacggcggcgcgagatcgag
gagctggaggaagcgtgcaaaaaagctctcacccaggtggaaacgacccagggcgactta
aacatccaggagggcattctccaggagaagaaggaggagctggaagcggttcgaagcgcc
atccagaagctgtacctggaacagaacaccctgcgcatgaacttggcccagctggaggag
aagaaagcggagatcgccggttcctacgtggatttggagcgggagcggggacagcttgac
gagcaggtccgggaaatctccggcagccaggcggccctgaagcaggaaaccgccgctctg
gaggagaaaaacaccctctccggtcaggcggtggaggaaaagaccgccgcactggaggag
gccaagacttcccgcgaaacctgcgccgcagagctggcgcagattcaggtggaggccgca
gagctgaagcagaagctggacttccttcaggaaaatgtggaccgcgtccgcgctgagatg
cgaaagctgacggccgagtatcgggacctggaagccggggaccgaaacgcccagggaatc
atcgaggcgcgccggcaggaaatcgccgccctgaaggagaagattgccgggattgccgta
catacaaaggagctggaggagcggctgaccgctcagacagccaaaaaggaggagatggcc
gggcgtcagaagggatttttcatccggcgcgaggagctgtccgcccgcatgtccgatctg
gacaaggacatgttccggctgcaggcccagcaggaaaagctggaggagcggctggagcac
tccactacctacatgtggaacgagtatgagatgactttttccagcgccgaagccctgcgg
gacgaggcatacggctctttgagcgaggtccgcaggcagatcgacgacctcaagggaagg
atcaaggccctgggcaatgtcaatgtaaatgccatcgaggactaccgggaggtatccgag
cgctatgagtttatgaaaacccagcacgaggatctggtggccgctcaggcggagctggaa
aaaatcatcgtggagctggacaccggcatgcgccgccagttccaggagaaattcggggag
atccgggccgagttcgacaaggtgttcaaggagctcttcggcggcggccgtggcgccctg
gagctgatggaggacgaggacatcctggaggcggggattcagatcatcgcccaacccccg
ggcaaaaagctgcagaacatgatgcagctgtccggcggcgagaaggcgctgaccgccatc
tccctgctgttcgccatccagaacttaaagccctcgcccttctgtctcctggacgagatc
gaggcggcactggacgactccaatgtggaccgtttcgcaggctacctgcacaagctgacg
cgcaatacccagtttatcgtgatcacccaccgacgcggcaccatggtcagcgccgaccgg
ctctacggaatcaccatgcaggagaagggcgtatccacgctggtgagcgtaaacctgatc
gaggatgatctggacaaataa
DBGET
integrated database retrieval system
