KEGG   Clostridium asparagiforme: NQ535_18720
Entry
NQ535_18720       CDS       T08571                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K02647  carbohydrate diacid regulator
Organism
casp  Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:casp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:casp03000]
    NQ535_18720
Transcription factors [BR:casp03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    NQ535_18720
SSDB
Motif
Pfam: HTH_30 GGDEF_2 HTH_8 NagA_C HTH_20 DUF6181
Other DBs
NCBI-ProteinID: UWO74865
LinkDB
Position
complement(4125442..4126530)
AA seq 362 aa
MISNQILQTTLDGLKGITRIDLCICDTEGKVLASTFTDAEDSESSILAFVDSPADSQVIQ
GFQFFKVFDEHQLEYIMLAKGASDDVYMVGKLAAFQVQNLLVAYKERFDKDNFIKNLLLD
NLLLVDIYNRAKKLHIDTDVKRVVYIIETHNEKDVNALETVRSLFATKTKDFITAVDEKN
IILVKEVKQGESYSELDKTANTILDMLNTEAMTKVRVAYGTIINDIKEVSRSYKEAKMAL
DVGKIFYSNKNVIAYNNLGIGRLIYQLPIPLCKMFIREVFDGKSPDEFDEETLTTINKFF
ENSLNVSETSRQLYIHRNTLVYRLDKLEKSTGLDLRVFEDAITFKIALMVAKYMRYMESL
DY
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgatttcaaatcagatactgcagactacattagatggattaaagggcattaccagaatt
gatttatgcatttgcgatacagaaggtaaagtgttggcatccacattcacggacgcggaa
gattccgagagttccattctggcctttgtggattctccggccgacagccaggtgatccag
ggatttcagttcttcaaggtgtttgacgagcaccagttagagtacatcatgctggccaag
ggcgccagcgacgatgtctacatggtgggcaagctggccgcgttccaggtacagaacctg
ttggtggcctacaaggagcgttttgacaaggacaacttcatcaagaacctgctgttggac
aacctgctgctggtggacatctacaaccgcgccaagaagctgcacatcgataccgatgtg
aagcgggtggtatacattattgagacccacaacgagaaggacgtgaacgcactggagacc
gtgcgcagcctgttcgcaaccaagaccaaggacttcatcaccgctgtggatgagaagaac
atcatcctggtgaaggaagtgaagcagggcgagagctacagcgagctggacaagaccgcc
aacaccattctcgacatgctgaacaccgaggccatgaccaaggttcgcgtggcttacggc
accattatcaatgatattaaggaagtttcccgttcttataaggaagcgaagatggctctg
gacgtgggcaagatcttctacagcaacaagaacgtgatcgcctacaacaacttgggaatc
ggccgtctgatctaccagctgcccatcccgctgtgcaagatgttcatccgcgaggtgttt
gacggcaagtcccccgacgagttcgacgaggagactctgaccaccatcaacaagttcttt
gagaacagcctgaatgtgtccgagacctccagacagctctacatccacagaaataccctg
gtataccgcctggataagctggagaagagcaccggactggatctgcgggtgttcgaggat
gccatcaccttcaagatcgcactgatggtcgccaagtatatgcgctacatggagagctta
gattattga

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