Clostridium asparagiforme: NQ535_19890
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Entry
NQ535_19890 CDS
T08571
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
casp
Clostridium asparagiforme
Pathway
casp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NQ535_19890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
casp02000
]
NQ535_19890
Transporters [BR:
casp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NQ535_19890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
UWO75077
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All DBs
Position
complement(4386239..4387531)
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AA seq
430 aa
AA seq
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MSSGTIIGFSCIALLILLFLKVPVYGAILGSTIIYFVLQPDVTIYLIIQRMIAGIESIPL
LAVPFFIAAGVFMNYTGVTKRIMDFCTVLTCKLPGGLAQVNVLLSTMMGGLSGSSLADAA
MEAKMLEPEMERHGYSKPFSSAVTAFSSIITPLIPPGIAAILYGSIANLSIGKLFIAGIG
PGLLLCTSMMLLCGIISKKRGYQAYGQARMDRKELGTKFRHAILPLCLPVIIIGGIRLGI
CTPTEAGSIAVVYSIILGVLYRELGWGELKKGLRESVLTTASVLIIVSAASAFSWILTRE
QIPQKLTALMTTYIGGKYAFLVIVNVFLLFVGMFIEGNAALIVLVPLLHPMAVAFGVDPI
QFALIFNFNMAIGAVTPPMGTLMFTVCGITKCKMKDFIVAGLPFYALALGCLALLTFVPV
FTLGIVNLVF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaggaacaatcataggattttcgtgcatcgcgctcttgattctcctcttcctc
aaggttcccgtttacggggcaatccttggcagcaccattatttatttcgtgctgcagccg
gacgttaccatctacctgattattcagaggatgatcgccgggatcgagagcatcccgctt
ctggccgtgccgttttttatcgcggcgggcgtatttatgaattatacgggcgtcactaag
cggatcatggatttctgtacggtgctgacctgtaaactgccgggtggtctggcgcaggtg
aatgtgctgctgtcgacgatgatggggggcctgtcgggttcttccctggcggatgccgcc
atggaggccaagatgctggagccggagatggaacgccatggatacagcaagccgttttct
tcggcggtgacggcattttcatcgatcatcacgcccttaatccctccgggaatcgcggcg
attctgtacggttcaatcgccaatctgtccatcgggaaactgtttatcgcggggatcggt
cctggtttgctgttgtgtacatcgatgatgttactctgcgggattatctctaaaaagcgc
ggctaccaggcgtacggacaggccaggatggacaggaaggagctgggcacgaaatttcgc
cacgcaattctgccgctctgcctgccggttatcattataggaggcatccggctgggcatc
tgcacgcccacggaggcggggtccatcgcggtggtttactccattatcctgggggttctc
taccgggagctgggctggggcgagctgaaaaaagggctcagggagagcgtgcttaccacg
gcttccgtgctgattatcgtgtcggcggcatcggcgttttcctggattttgaccagagag
cagattccccagaagctgacggccctgatgaccacctatatcggcggaaaatacgcgttt
ctggtgattgtcaatgtattccttctgtttgtgggaatgttcatcgagggaaacgcggcg
ctgatcgtgctggtaccgctgctccatcccatggcggttgcctttggcgtggatccgatc
cagtttgcgctgatcttcaatttcaacatggcgataggcgcggtaactccgcctatggga
acgcttatgtttaccgtctgcggcatcaccaagtgcaagatgaaagattttatcgtagcg
ggcctgccattttacgcgctggcgctgggctgcctggcgttgctgacctttgtgccggta
tttacgctgggaattgtcaatttagtattctag
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