Clostridium asparagiforme: NQ535_22035
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Entry
NQ535_22035 CDS
T08571
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
casp
Clostridium asparagiforme
Pathway
casp00300
Lysine biosynthesis
casp00470
D-Amino acid metabolism
casp01100
Metabolic pathways
casp01110
Biosynthesis of secondary metabolites
casp01120
Microbial metabolism in diverse environments
casp01230
Biosynthesis of amino acids
Module
casp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NQ535_22035 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NQ535_22035 (dapF)
Enzymes [BR:
casp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NQ535_22035 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
UWO75486
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Position
complement(4863965..4864798)
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AA seq
277 aa
AA seq
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MRFTKMQGIGNDYVYVNCFEETVADPAAVARFVSDRHFGIGSDGLILIGPSGTADCRMDM
YNMDGSRGVMCGNGVRCVGKYAYDHGLVPGDRRSLTVETLAGVKTIEFTVEEKNGRFTAR
LLTVDMGEARLTSELPEPINVDGRDYSFVGISVGNPHAVYFMDSIDDLRLDRIGPSFEMH
PRFQPDRVNTEFIQLVDRNHIRMRVWERGSGETWACGTGATASAAAAILMGYTEDEVEVE
LRGGKLRIRLDRESGHLFMTGPAVEVFRGDIDIPENL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagatttacaaaaatgcagggaatcggcaacgattacgtttatgtgaactgttttgag
gagacggtggcagacccggccgctgtggcgcggtttgtcagcgaccggcatttcggcatc
ggctccgacggtctgattctgatcggcccgtccgggaccgcggactgccgcatggatatg
tacaatatggacggctcccggggcgtgatgtgcggcaacggcgtgcgctgcgtgggtaag
tacgcctatgaccacggtctggtacccggggacaggagaagcctgaccgtggagactctg
gccggagtcaagaccatcgagtttacggtggaggagaaaaacggccggtttaccgcaaga
cttctgaccgtggacatgggggaggccaggctgacctcagagcttcccgagccgatcaac
gtggacgggagggattactcctttgtggggatcagcgtgggtaatccccatgcggtgtat
ttcatggattccatcgacgatctgaggctggaccggatcggtccttcctttgaaatgcat
ccgcgtttccagccggaccgggtgaacaccgagttcatccagctggtggaccgcaaccat
atccgtatgcgggtatgggagcggggcagcggggagacctgggcctgcggcaccggggcc
acggccagcgctgcggctgccattctcatgggctacacggaggacgaggtggaggtggaa
ctgcggggcgggaagctgcgcatccgcctggaccgggagagcggccacctgtttatgacc
gggcctgcggtggaagttttccgcggggatattgacattccggaaaatttataa
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