Clostridium asparagiforme: NQ535_22770
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Entry
NQ535_22770 CDS
T08571
Name
(GenBank) DEAD/DEAH box helicase
Organism
casp
Clostridium asparagiforme
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_assoc
WHD_Lhr
DEAD
Helicase_C
WHD_4th_Lhr
WHD_3rd_Lhr
ResIII
Motif
Other DBs
NCBI-ProteinID:
UWO79651
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Position
complement(5045900..5050114)
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AA seq
1404 aa
AA seq
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MQQDVLKLFSPATAEWFTNTFGEPTDVQKAAWPAIAAGKPALVSAPTGTGKTLSAFLIFI
DRLNALARERELKEELYLIYISPLKSLAGDIRENLRRPLLGIPREEGQEEIQVGIRTGDT
PQKDRQRMIKHPPHILITTPESLFLMLTSKNGRSVLKTARALIIDELHALIDTKRGAHLM
LSVARLDQLCGRNLQRIGLSATIEPLELAAAYLSPEPVQICAPAMKKQVRIQVIGTAPAV
GRRKDPVWEELGMAVYRQCLECRSVIAFSEGRRYAEKLAYYVNLLGGDGFARVHHGSLSK
EQRAVAEQDLREGRLRLLCATSSMELGIDVGDVERVLQVGCPRTISSTMQRLGRAGHNPG
RVSEMLMYPRTASETVYCGMTAQVARLGGVEQARPPRMCLDVLAQHLVSMAAGEGYSVED
VLEILKRAYSFRDVTGEDVRQTLEMLAGDYEHDREIPVRPRVLYDRIHGLVAGDNYSRML
ATAAGGTIPDKGLYVAKTEDGVTLGELDEEFVYESQIGDKFMLGSFGWRIVRQDKDSVIV
TQAPAEGARLPFWKGETKGRSLRTSLAFGKILRELERALSEGKLPEQLGALGLDEAAAEH
AAGFIRRQIQATGGLPDDRTIIVEHFRDSTGSHQVMIHALFGRRVNAPLSLLVQRAAVTM
TGMEAGCVDEEEGFLLYPYGKEQLPEGLLYQIDPERVRPVLEALLPETPLFAMSFRYNAA
RALMMGMRHAGRQPLWMQRLRSAEMLSSLIETPDHPLIRETKRECLEDQWDIDSVIQILN
DIRAGLIAVREIHVDIPSPMSLPFQWQVETAEMYEYSPTTSKIRRAVSEELKRAELVKPP
AEELSKKWERRKLPENEEQLHALLMMEGDLAAGELEVPAEWLDNLARRGLACYLEPGIWV
AAEQREAYETALGAGRNAGEGEQAGRHIVRRLLYYRGGQTAGAVQERYFLAEGVSERILY
ALCASGDVVEDGGVYYHGKLYERAREGYIRSLRTQTATQPSEHFAALAALRAVAAGPPEE
QLKQTVSLYCGRMFPVKYWESVLLPRRIRRYSGAMLDKLLAEGDYFWRMTPEGNLCFCRY
EDIDWDAPLPKGAESLEGDELLMYRELARRGASFLKFLTGVPKEDSAQEVLLRLAEKGLV
CADSFVPVRQWQNREKVKKATARQRVNARVMALSAGRWDVVRPVKQWSEEAWLEAFFTEN
GLLCRETFRKSLAEVSGSPYLAGGAECGGSGERQEHQTSEPFSWKRALELLRIWEYTGRI
RRGYFVAGLSGAQFIRREEYDGITAALKDPAKQILWLNGTDPAVQWGKALEMPAEQGFLA
IPGTAVALNTGRLTAVMERQGKILRVYEPDCLEEVLTEFVRDYRQNALFAEQRRITVKEY
PREAGEALRRAGFMQEMGDFVLYR
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggacgtactgaaacttttttcacccgcaacggcggagtggtttacaaataca
ttcggagagccaacggatgtgcagaaagcggcctggcccgccattgcggccgggaaaccg
gccctggtcagcgcgccgacgggaaccggaaagactctgtccgcattcttgatttttatc
gaccggttaaacgccctggccagggagagggagcttaaggaggaactgtatctgatctat
atttcccccctcaaatccctggccggggatatccgggagaacctgcggcggccgctcctt
ggcatcccgcgggaggaggggcaggaggagatccaggtgggaatccgcaccggggacacg
ccccagaaggaccggcagaggatgatcaagcatccgccccacatcctgatcaccaccccg
gagtccctgtttctcatgctgacatccaaaaatggacggtctgtgctgaaaacggcccgg
gcgctgatcatcgacgagctccacgccctcatcgacaccaaacggggagcgcacctgatg
ctctccgtggccagactggaccagctctgcggcagaaatttacagcgcatcggcctgtcc
gccaccattgaacccctggagctggcggctgcgtacctgtcccctgagccggtgcagatt
tgcgccccagccatgaaaaaacaggtcaggattcaggtcatcggcaccgcgcccgcggtg
gggcggagaaaggacccggtctgggaagaactgggaatggcggtgtaccggcaatgtctg
gaatgccggagcgtgattgcattttccgagggacgccgctatgcggaaaagctggcgtac
tatgtaaatctgctgggaggggacggcttcgcccgggtccaccacggcagcctttccaag
gagcagcgggcagtggcggagcaggacctgcgggaagggcggctccgcctgctgtgcgcc
acctcatccatggagcttggcatcgacgtgggcgacgtggagcgggtgctgcaggtgggc
tgccccagaaccatttccagcaccatgcagcggctgggccgggccggacacaatccgggg
cgggtcagcgaaatgctcatgtatccgcgtaccgcctcagagaccgtatattgcggcatg
accgcccaggtggccagactggggggcgtggaacaggcccggccgcccaggatgtgcctg
gatgtgctggcccagcacctggtgtccatggccgcaggggagggatacagcgtggaagat
gtgctggaaatccttaagcgggcttactccttccgggacgtgaccggggaggacgtgcgg
cagacgctggaaatgctggccggggactatgagcacgaccgggaaatccccgtgcggccc
cgggtgctgtacgaccggattcacggtctggtggccggggacaactacagccgcatgctg
gccacggcggcgggcggcaccataccggacaaaggcctttacgtggccaaaaccgaggac
ggggttaccctgggggagctggacgaggaattcgtctacgagtcccagatcggggacaag
ttcatgctgggctccttcggctggcggattgtgcgccaggacaaggactcggtgatcgtc
acccaggctccggcggagggggccagactgcccttctggaagggggagaccaagggacgt
tccctgcggaccagcctggcctttggaaaaattttgcgggaactggagcgggctttgtcg
gaggggaagctgccggaacagctgggggccctggggctggacgaggccgccgcagagcat
gcggccgggtttatcaggcggcagattcaggccacgggcggcctgccggacgacaggacc
attatcgtggagcattttagggacagcacgggcagccaccaggtgatgatccacgcactg
ttcgggcggcgggtcaacgcgcccctgtcgcttctggtacagcgggccgccgtaaccatg
acggggatggaggcgggctgtgtggacgaggaagaaggctttcttctgtacccctacgga
aaggaacagctgcctgagggcttgctgtatcagatcgacccggagcgcgtgcgcccggta
ttggaggcgcttttgccggaaacgcctctgtttgccatgagcttccgctacaacgcggcc
cgggccctgatgatggggatgcgccatgcgggccggcagcccctgtggatgcagcggctg
cggagcgcggagatgctcagctccctgatcgaaacgccggaccatcccctgatccgggag
acgaagcgggaatgcctggaggaccagtgggacatcgacagcgtcattcagatattgaac
gacatccgcgccggtttgatcgccgtgcgcgaaatccatgtggacattccttcgcccatg
tccctgcccttccagtggcaggtggagacggcggaaatgtatgagtattctcccaccacc
tccaaaatacgccgcgccgtcagcgaggagctgaagcgggcggagctggtgaagccgcct
gccgaggaattatccaaaaaatgggaacgcaggaagctgccggaaaatgaggagcagctc
cacgccctgctgatgatggaaggagatctggccgccggagagttggaggtgcccgccgaa
tggctggacaacctggcgagacgcggcctggcctgctacctggaaccgggaatctgggtg
gcggcggagcagcgggaagcgtatgagacggctttgggggcggggaggaatgcgggggag
ggggagcaggccgggcggcatattgtgcggcggctgctctactaccggggcggacagacc
gcgggggcggttcaggagcggtatttcctggctgagggggtttccgagcggattttgtac
gcgctctgcgcctccggggacgtggtggaggacgggggagtttactatcacggaaagctt
tatgagcgggcccgggagggatacatccgcagcctgcgcactcagaccgcgacccagccg
tcggagcatttcgccgccctggcggccctcagagcagttgcggccgggccgcccgaggag
cagctgaagcagaccgtgtctctgtactgtggacggatgtttcctgtaaaatactgggaa
agtgtcctgcttcccagacggatcaggcgttacagcggggccatgctggacaagctgctg
gcggagggggattatttctggcggatgacgccggagggaaatctctgcttttgccggtat
gaggacattgactgggatgcgccgctgccaaagggcgcggagagcctggagggcgacgaa
cttctcatgtaccgggaactggcgcgccggggagccagcttcttaaaatttctcaccgga
gtgccgaaggaggacagcgcccaggaagtgctgctgcgcctggcggagaaagggctggtc
tgcgcggacagcttcgtgccggtgcgccagtggcagaaccgggaaaaagtgaaaaaagcc
acggccagacagcgggtaaacgcccgggtcatggccctgtccgccggtcgctgggacgtg
gttcggccggtgaagcagtggagcgaggaagcgtggctcgaagcatttttcacggaaaat
ggattgctgtgccgggagacgttccgaaagtctctggccgaggtcagcggctcgccgtat
ctggcgggtggagctgagtgcgggggaagcggagagcgtcaggaacatcaaacatcggag
cccttcagctggaaacgcgccctggaactgttgcgaatctgggagtacaccgggcgaatc
cgccggggatattttgtggccggtctgtcgggcgcccagttcatccgccgggaagagtac
gacggcataaccgccgccctgaaggacccggcaaaacaaatcctgtggctgaacggcacc
gacccggcagttcagtggggcaaggccctggaaatgcctgcggagcagggattcctggcg
attcccggaaccgctgtggcgctgaacacaggccgcctgaccgcggtaatggagcgccag
gggaaaatcctgcgggtatacgagccggactgcctggaagaagttctgactgaatttgta
cgggattaccggcagaacgcgctgttcgcggaacagaggcgaattacagtgaaggagtat
ccacgcgaggccggggaagcgctgcgaagggcgggattcatgcaggagatgggggatttt
gtgttgtatcggtaa
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