Clostridium asparagiforme: NQ535_24230
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Entry
NQ535_24230 CDS
T08571
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
casp
Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NQ535_24230
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
Tex_central_region
S1
HHH_9
HHH_7
S1_RRP5
YqgF
T2SSK
HHH_6
DUF6532
Motif
Other DBs
NCBI-ProteinID:
UWO75881
LinkDB
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Position
complement(5375378..5377525)
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AA seq
715 aa
AA seq
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MDIIKTLAEELKIGRGQVEATVKLIDEGNTIPFIARYRKEVTGSLNDEVLRDLDERLRYL
RNLEDRKEQVIASIRDQEKLTPELEQQIRAAATLVAVEDLYRPYKPKRRTRATIAKEKGL
EPLADLIFMQMAKEPLEKAAAPYISQEKGVETVEEAISGAKDILAERVSDNAQYRTYIRS
ATMREGTLQSTAKDEKAQTVYETYYNYEEPIRKAAGHRVLALNRGENEKALAVKVTAPEE
TILRYLEKQVIVRENPYTTPALKAVVQDSYERLIAPSIEREVRNELTEKAEEGAIKVFGK
NLEQLLMQPPIVGRVVLGWDPAFRTGCKLAVVDGTGKVLDTVVIYPTAPQNRVEESKKIL
KNLIKKYNVSLISVGNGTASRESEQIIVDLLKEIKEQVQYVIVNEAGASVYSASKLATEE
FPQYDVGQRSAVSIARRLQDPLSELVKIDPKSIGVGQYQHDMNQKRLGEALGGVVEDCVN
RVGVDLNTASASLLEYISGISKALAKNIVAYREENGAFSNRRQLLKVAKLGPKAFEQCAG
FMRILGGENPLDATSVHPESYKAAGALLEKLGYKPEELKAGGLSGIRGKVRDYRKMSEEL
GVGEITLRDIVSELEKPARDPRDEMPRPILRTDVMDMKDLKPGMVLKGTVRNVIDFGAFV
DIGVHQDGLVHISQMTDRYIKHPLEAVSVGDVVDVKVLGVDLAKNRISLTMKGLK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatattattaagacactggcagaagaactgaaaatcggccgcggccaggtggaagcg
actgtaaaattaattgacgaggggaataccatcccctttatcgcacgttaccgcaaggaa
gtgaccggttccttaaacgacgaagtgttgcgcgatctggacgagcgtctgcgttatctg
cgcaacctggaggaccgcaaggagcaggtgatcgcctccatccgcgaccaggaaaaactg
accccggagctggaacagcagattcgcgcggccgccaccctggtggcggtggaggatctg
taccgcccctacaagcccaaacgccgcaccagggccaccattgccaaagagaaggggttg
gagccgctggcggacctgattttcatgcagatggcgaaggaaccccttgaaaaggcggcg
gccccgtacatttcccaggaaaagggcgtggagacggtggaggaggccataagcggcgca
aaggatatcctggcggagcgggtgtccgacaacgcacagtaccgcacttacatccgcagc
gccaccatgcgggagggaacgctccagtccacggctaaggatgaaaaagcccagacggtc
tatgagacctactacaactacgaggagcccatccggaaggcggcgggccaccgggtgctg
gcgttaaaccgcggcgagaacgagaaggcgctggcggtgaaggtgacggctccggaggaa
accattctgcgctaccttgaaaagcaggtgatcgtgcgggaaaatccctacaccacgccc
gcgctgaaagcggtggtgcaggacagctacgagcgcctgatcgccccttccattgagcgc
gaggtgcgaaacgagctgacggagaaggccgaggagggcgccatcaaggtgttcggcaag
aacttagagcagctgctcatgcagcctcccattgtgggccgcgtggtgctgggctgggat
ccggcgttccgcaccggctgcaagctggcggtggtggacggcacgggtaaggtgctggac
accgtggtgatctaccccactgcgccccagaaccgggtggaggaatccaaaaagatttta
aagaacctgatcaaaaaatataacgtttccctgatctccgtaggcaacggcacggcgtcc
cgggaatccgaacagatcatcgtggacctgctgaaggagatcaaagagcaggtgcagtat
gtgatcgtcaacgaggcgggagcctccgtgtactcggccagcaagctggctaccgaggag
ttcccgcagtacgacgtggggcagaggagcgccgtgtccatcgccagaagactgcaggac
ccgctgtccgagctggtgaagatcgaccccaagtccatcggagtgggccagtatcagcac
gacatgaaccagaagcgcctgggcgaggccctgggaggcgtggtggaggactgcgtgaac
agggtgggtgtggacttaaacacggcctccgcctctttgcttgagtatatttccggcatc
agcaaggccctggcgaagaatatcgtggcctaccgggaggagaacggagcgttttccaac
cgcaggcagctgcttaaggtggccaagctgggccccaaggcctttgagcagtgcgcgggc
tttatgcgtattctgggtggggagaatcccctggacgccaccagcgtgcacccggagagc
tacaaggccgcgggcgcgcttttggaaaagctgggttacaagccggaggagctgaaggcc
ggggggctctcgggaatccgcggcaaggtgcgggattaccggaaaatgtccgaagagctg
ggcgtgggagagattaccctccgggatattgtgagcgagctggagaagccggcccgggat
ccaagggacgagatgccaagaccgattctgaggaccgacgtgatggatatgaaggactta
aagccgggaatggtgcttaagggcacggtgcgcaacgtcatcgacttcggcgcctttgtg
gacatcggcgtacaccaggacggtctggtacacatttcccagatgacggaccgctacatc
aagcaccccctggaagccgtcagcgtgggtgacgtggtggatgtgaaggtgctgggtgtg
gatctggccaagaaccggatctccctgacgatgaaagggctgaaataa
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