Clostridium asparagiforme: NQ535_24985
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Entry
NQ535_24985 CDS
T08571
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
casp
Clostridium asparagiforme
Pathway
casp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NQ535_24985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
casp03400
]
NQ535_24985
Enzymes [BR:
casp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NQ535_24985
DNA repair and recombination proteins [BR:
casp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NQ535_24985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
AAA_22
PIF1
Helicase_RecD
nSTAND3
UvrD-helicase
HHH_2
NPHP3_N
T2SSE
NTPase_1
HHH_3
AAA_28
AAA_16
MeaB
AAA
SRP54
UvrD_C
KTI12
SLFN-g3_helicase
Apocytochr_F_C
FtsK_SpoIIIE
TrwB_AAD_bind
Reovirus_L2_6th
Motif
Other DBs
NCBI-ProteinID:
UWO76018
LinkDB
All DBs
Position
complement(5533401..5535683)
Genome browser
AA seq
760 aa
AA seq
DB search
MATITGFIEKIKFRNEENGYTVLTATDQHDGDEVVMVGNFAYVGEGDMIQATGRLTEHPI
YGEQLQVESYEIKTPEDTLSMERYLGSGAIKGIGAALAARIVRHFKADTFRIMEEEPERL
SEVKGISEKMAMAIAEQVEEKKDMRQAMMFLQNYGISLNLAVKIYQEYGPKLYGILKENP
YRLADDIPGVGFKMADEIAGKVGIFTDSDYRVKAGMLYTLLQAVGNGHTYLPLNELLKEA
CELLKVAPSAMDKHLMDMQMEKRLVVKNTPEGQIVYSSQYYYLELNTARMLHDLNIRGGI
PETEIKSRLLKVEQQESIQLDGLQEQAVMEAVNSGLLIITGGPGTGKTTTINTIIRYFEM
EGMEILLAAPTGRAAKRMTEATGCEARTIHRLLELVPAPAATARDIPGAPGGKGGPSGMA
GMHFERNEENPLDADVIIIDEMSMVDIHLMHALLRAVNVGTRLILVGDVDQLPSVGPGNV
LRDMIDSQCFNMVKLTRIFRQAAQSDIIVNAHRINEGQPVDLAKRSNDFLFIRRENPDAI
ISAMVTLIQKKLPGYVKAQPYDIQVMTPMRKGALGVERLNQILQSFLNPPDKTKTEKESG
GTIYRVGDKVMQIRNNYQMEWEVVNRYGIPIETGSGIFNGDMGIIREINDYAELLTVEFD
EGKRVEYSFKQLEELELAYAITIHKSQGSEYPAVIIPMHSGPRMLMTRNLIYTAVTRART
CVCLVGLPEVFAAMAGNSMEQKRYTGLRQRIEELYALEEE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatcacaggatttattgagaaaatcaagttccggaacgaggaaaacggctac
acggtcctgactgccacggaccagcacgacggcgacgaggtagtcatggtgggaaacttc
gcctatgtgggcgagggtgatatgatccaggccacgggccgtttgacggaacaccctata
tacggtgagcagctgcaggtggagagctacgagatcaagactcccgaggacacgctgtcc
atggaacgatatctaggctccggtgccataaaaggcatcggggccgctttggctgcccgg
attgtccgccatttcaaagccgacaccttccggattatggaggaggagccggagcgcctc
tccgaggtcaagggcatcagcgagaagatggccatggccatcgccgagcaggtggaggag
aaaaaggacatgcgccaggccatgatgttcctgcagaactacggcatttccctcaatctc
gctgtaaaaatttaccaggagtacggccccaagctctacggcattctgaaggaaaatccc
tatcgcctggccgacgacattccgggcgtgggatttaagatggcggatgagatcgccggg
aaggtgggcattttcaccgactccgactaccgggtgaaggcggggatgctctacaccctc
ctgcaggcggtgggaaacggccatacatacctgccgttaaacgagctgctaaaggaggcc
tgcgagctgctgaaggtggccccctccgccatggacaagcacctgatggatatgcagatg
gagaagcgcctggtggtgaaaaataccccggaggggcagattgtctactcctcccagtat
tattacctggagctgaacacggctcggatgctccacgacttaaacatccgcggcggcatc
ccggagacggagatcaagagccgcctgctgaaggtggagcagcaggaatccattcagctg
gacggactccaggagcaggcggtgatggaggcggtgaacagcggtctgctcatcatcacc
ggcggccccggaacgggaaaaaccaccaccatcaacaccattatccgctactttgagatg
gagggcatggaaatccttctggcggcccccaccggccgcgcagccaagcggatgaccgag
gccacgggctgcgaggccagaaccatccaccgcctgctggagctggtgcccgctcccgcg
gccacggccagggatatccccggagctcccggcggcaagggagggccgtccggcatggcg
gggatgcattttgagcgcaacgaggagaatccgctggacgcggacgttattatcatagac
gagatgtccatggtggacatccacctcatgcacgccctgctgcgggctgtgaatgtggga
acccggctgatcctggtgggcgacgtggaccagctgcccagcgtgggacccggaaacgtg
ctgcgggatatgatcgattcccagtgcttcaatatggtcaagctgacccgcattttccgg
caggcggcccagagcgacatcatcgtgaacgcccaccggatcaacgagggccagccggtg
gacctggccaagcgcagcaacgattttctgttcatccgccgggagaacccggacgccatc
ataagcgccatggtcaccctgatccagaagaagctgcccggctacgtcaaggcccagccc
tacgacatccaggtgatgacgcccatgcgcaagggggccctgggggtggagcggctgaac
cagattctccagagcttcttaaatccgccggacaagaccaagacggagaaggaatccggc
ggcaccatctaccgggtaggcgacaaggtcatgcagatccggaacaattaccagatggag
tgggaggttgtgaaccgctacggaattcccattgagaccgggagcggaatcttcaacggc
gacatgggcatcatccgggagatcaacgactacgccgagcttctgaccgtggagtttgac
gagggcaagcgggtggagtacagcttcaagcagctggaagagctggagctggcctacgcc
atcaccatccacaagtcccagggcagcgagtaccccgcggtgatcatccccatgcacagc
ggcccgcggatgctcatgacccggaacctgatctacaccgccgtcacccgcgcccgtacc
tgcgtctgcctggtgggcctgccggaggtatttgccgccatggccggcaacagcatggaa
cagaagcgctacacagggctgcggcagcggattgaagagctgtacgcattggaggaggag
tag
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