Clostridium asparagiforme: NQ535_25000
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Entry
NQ535_25000 CDS
T08571
Name
(GenBank) LacI family transcriptional regulator
KO
K26609
LacI family transcriptional regulator, galacturonate utilization repressor
Organism
casp
Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
casp03000
]
NQ535_25000
Transcription factors [BR:
casp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NQ535_25000
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_10
HTH_23
HTH_28
HTH_Tnp_ISL3
HTH_29
HTH_3
HTH_Crp_2
MarR_2
HTH_24
TetR_N
HTH_38
MarR
HTH_IclR
HTH_AraC
DUF2089
HTH_6
HTH_7
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
UWO76021
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Position
complement(5541053..5542042)
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AA seq
329 aa
AA seq
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MAVTIKDIAKKAGVSYSTVSRALNDQNADKSDKKKRILRIAKEMGYVPNQAAINLKMSRS
YVIGLYFSTISKMTSPFVLHDVLTGVYSVVGSRYNVVVKGIDMHEPGTLNPTYYDGIIVL
SQRNEDLAFMEEVMDKNIPMVVICRTVFLDVPNVTTDESRAVEKAMDYLLENGHKNIGVI
EGDPRLDSTRLRHRGWRAAAEAHGLDPERIPVEYGNYRFTSGYQAARKLLEQELTAILCF
NDEMAFGAREAIVELGLKVPDDISLIGFDNWDMSGYASMKLTTVERNMGDIAIEGTRILL
RRLEDGIIDNRRVYLENKLIIRETVRNLN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcagttacaatcaaggacattgcaaaaaaggcgggcgtatcctattcaacggtatcc
agggcattgaacgatcagaacgctgacaaatcagacaagaaaaagaggattttaagaatc
gccaaggagatgggctacgtgcccaaccaggcggctatcaaccttaaaatgtcaagatcc
tatgtgatcgggctctatttttccacgatcagcaagatgacctccccctttgtgcttcac
gatgtgctgaccggggtctacagcgtggtgggcagccggtacaatgtcgtggtcaagggc
atcgacatgcacgagccgggcacgctcaaccccacctactacgatggcatcatcgtcctg
tcccagcggaacgaggacctggcgttcatggaagaggttatggacaagaacatccctatg
gtagtgatctgccgcaccgtgttcctggacgtccccaacgtgaccacggacgagtcgcgg
gccgtggagaaggctatggactacctgctggaaaacggccacaaaaacatcggtgtgatc
gagggagacccgcgcctggattccaccaggctgcgccacaggggatggagggccgcagcc
gaggcccacggcctcgatccggagcgcatcccggtggagtacggaaattaccgttttaca
agcggatatcaggcggccaggaagctgcttgagcaggaactgaccgccatactgtgcttt
aacgacgaaatggccttcggcgcccgggaggcgattgtggagctgggccttaaggttccc
gacgatatctcactgatcggattcgacaactgggatatgtcgggttacgccagtatgaag
ctgaccactgtggagcggaacatgggcgatatcgcaatcgagggcacccggattctcctg
cgccgcctggaggacggaatcatcgacaaccgcagagtgtacctggagaataaactgatc
atccgcgagacggtgagaaacttaaattga
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