KEGG   Castellaniella sp. MT123: ABCV34_00515
Entry
ABCV34_00515      CDS       T11683                                 
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
  KO
K04763  integrase/recombinase XerD
Organism
cast  Castellaniella sp. MT123
Brite
KEGG Orthology (KO) [BR:cast00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cast03036]
    ABCV34_00515 (xerD)
Chromosome and associated proteins [BR:cast03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    ABCV34_00515 (xerD)
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_SAM_4 Tyr_recomb_halo_M MrpR_C_cat
Other DBs
NCBI-ProteinID: XAP01370
LinkDB
Position
complement(112544..113449)
AA seq 301 aa
MAISPSPFPTIDAFLDALWLEDGLADNTLSAYRRDLTAFAHWLRAAQDRPPESAHREDIQ
AWLAAQHQQTKASTANRRLAALRRFYLWALRRSLCHEDPCLGLHSARQPARFPKTLSEAQ
VDALLEAPDTDTTLGLRDRAMLETLYATGLRVSELVHLTVQDTSLNDGVVRVVMGKGAKD
RLVPLGAEALHWIERYLRESRPAILGARLCDALFATTRGAAMTRQAFWLLIRKYAHQADI
RVPLSPHVLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLKTLHAQHHPR
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atggctatttcgccttcgccctttcccacgatcgatgcatttctggatgccctatggctg
gaagacggcctggcggacaacaccttgtcggcttaccgcagggacctcaccgcattcgcc
cactggctgcgggccgcgcaggaccgcccccccgaatcggcgcaccgcgaagacatccag
gcctggctggcggcgcaacaccagcagaccaaggcgagcacggccaaccgccgtctggcg
gcactgcgccgcttctacctgtgggcgctgcgtcgcagcctgtgccacgaagacccttgc
ctgggcctgcacagcgcccgccagcccgcccgtttccccaagaccctgtccgaagcccag
gtcgatgccctgctggaagccccagacaccgacaccacgctgggcttgcgtgaccgcgcc
atgctggaaaccctgtatgccacgggcctgcgcgtcagcgaactggtgcacctgacagtg
caggacaccagcctgaacgacggagtggtgcgcgtggtcatgggcaaaggcgcgaaggac
cgtctggtgccgctgggcgccgaagccctgcactggatcgaacgatatctgcgcgaaagc
cgccccgccatcctgggggcgcgtctctgcgatgccctgttcgccacgacacgcggggcg
gccatgacccgccaggcgttctggctgctgatccggaaatacgcccaccaagccgacatc
cgggtcccgctctcgccccacgtgctgcgtcacgcctttgccacccatctattgaaccac
ggcgccgacctgcgcgtcgtgcagatgctgctgggccatgccgacatctccaccacgcag
atttacacccacgtcgcccgcgagcggctgaaaaccctgcacgcgcagcatcacccacgg
gcatga

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