KEGG   Castellaniella sp. MT123: ABCV34_02725
Entry
ABCV34_02725      CDS       T11683                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
cast  Castellaniella sp. MT123
Pathway
cast02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cast00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ABCV34_02725
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:cast02022]
    ABCV34_02725
Two-component system [BR:cast02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   ABCV34_02725
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 AAA_2 DUF6716 AAA_16 AAA Mg_chelatase HTH_50 AAA_7 PAS_4
Other DBs
NCBI-ProteinID: XAP01766
LinkDB
Position
610301..611698
AA seq 465 aa
MSSVDVVFVDDDEDVRDANTQALDLQGVVVHPCAGAREALDYLTPDFPGVLVTDVRMADM
DGLTLFRHVRRLDADIPVILITGHGDIEMAVGAMREGAYDFLSKPYAPERLLAAIRHGAA
QRHLVLENRRLRAQAAQVPDAASMLIGNAPAIVRIRELLRHVADADVDVLVHGETGSGKE
VVAQVLHRLSRRRDGPFVAINCGALPESVIESELFGHEAGAFTGAQKRRVGRIEHADGGT
LFLDEIESMSAAMQVRMLRVLETRQVMPLGTNEHRAVDVRVVAATKTDLGAPEIRSRFRE
DLYYRLNVVTVEIPPLRARREDIPVLFTHFAARAAQRFNCPVPPVDPVFWRHLMRHDWPG
NVRELAHAADRYVLGVHRIADEGGSQADEPAGSLPERVDHYEAELIREALAAHGGEIKAT
LAALGLPRKTLYDKLRRYGIDRQAFARPGLPDDAGVGDQPDEAGA
NT seq 1398 nt   +upstreamnt  +downstreamnt
gtgagctcggtcgatgtggtgttcgtcgatgacgatgaggatgtgcgggatgccaatacg
caggcgctggatctgcagggagtcgtggtgcatccctgcgcgggcgcgcgcgaggcgttg
gattacctgacgccggattttcccggcgtgctggtgaccgatgtgcgcatggccgatatg
gatggcctcaccctgtttcgccatgtgcggcgtctggatgccgacattcccgtcatcctc
attaccgggcatggcgacatcgagatggcggttggcgccatgcgcgaaggcgcttacgat
tttctgtccaagccctacgcccccgagaggctgctggccgccatccgccatggcgccgcg
cagcgtcacctggtgctggagaatcggcggcttcgggcacaggccgctcaggtgccggat
gcggcgtcgatgctgatcggcaatgccccggcgatcgtgcgtattcgggaactgctgcgc
catgtggccgatgccgacgtcgacgtgctggtccatggggaaaccggtagcggcaaggaa
gtcgtcgcccaggtcctgcaccggctcagccgccggcgtgatgggccattcgtggccatc
aattgcggggccttgccggaatcggtgatcgagagcgaattgttcggtcatgaagccggc
gcgttcacgggtgcccagaagcggcgggtaggccgcatcgagcacgccgatggcggcacc
ctgtttctcgacgagatcgagagcatgtcggcagccatgcaggtgcgcatgctgcgggtg
ctggaaacccggcaggtcatgcccctgggaaccaatgagcaccgggccgtcgatgtgcgc
gtcgtcgcggctaccaagaccgatctgggggcgcccgagatccgatcccgctttcgcgag
gatctgtactaccggctcaatgtcgtgaccgtggagatcccgccgttgcgggcgcgccgg
gaagacattccggtgctgttcacgcatttcgccgcccgggccgcgcaacgcttcaactgt
cccgtaccgccggtcgatccggtattctggcggcatctgatgcggcatgattggcccggc
aacgtgcgcgaactggctcatgcggccgatcgttatgtgctgggggtgcaccggattgcc
gacgagggcggctcccaggcggatgagccggctggcagcctgcccgagcgtgtcgaccac
tacgaagccgaactgatccgcgaggcgctggccgcgcatggcggcgagatcaaggccacg
ctggcggcgctgggcttgccgcgcaagaccctgtacgacaagctgcgacggtatggtatc
gaccggcaggcctttgcgcggccgggcttgccggatgatgcgggcgttggggatcaaccg
gacgaagccggggcctga

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