Castellaniella sp. MT123: ABCV34_05080
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Entry
ABCV34_05080 CDS
T11683
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cast Castellaniella sp. MT123
Pathway
cast00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cast00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABCV34_05080 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cast01007
]
ABCV34_05080 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cast03016
]
ABCV34_05080 (lysS)
Enzymes [BR:
cast01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ABCV34_05080 (lysS)
Amino acid related enzymes [BR:
cast01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABCV34_05080 (lysS)
Transfer RNA biogenesis [BR:
cast03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABCV34_05080 (lysS)
Prokaryotic type
Other AARSs
ABCV34_05080 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XAP02193
LinkDB
All DBs
Position
1105699..1107216
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AA seq
505 aa
AA seq
DB search
MTSQTEAQTPDENRLIAERRAKLAVLREGGPAYPNDFHPDTHAAKLHEDCDALDADTLQA
QGRRARVAGRMMLKRVMGKASFATLQDTSGRLQLYLDRGVLGDETYAAFKSWDIGDIVGA
EGQVFKTHKGELSLRVESLRLLTKSLRPLPDKFHGVADQELRYRQRYVDLIMTEETRQTF
LARTRIINAIRQVMTEADFLEVETPMLHPIPGGAAAKPFITHHNALDMEMYLRIAPELYL
KRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTEGLIRETTLR
VCGTTSLTYQERPLDLGRAFDRLTITEAILKYAPTYAPAQLQDTGFLRTELRRLGADVAG
PALAHAGLGALQLALFEETAESQLWHPTFIVDYPVEVSPLARASDTQPGITERFELFACG
REIANGFSELNDPEDQAARFQAQVAAKDAGDEEAMYYDADYVRALEYGMPPTGGCGIGID
RLVMMLTDSANIRDVILFPHLRRED
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgcaaaccgaagcccaaactccggatgagaaccgcctgatcgcggagcggcgc
gccaaactggccgtcctgcgcgaaggcgggcccgcctaccccaacgattttcaccccgac
acgcacgccgcgaagttgcacgaagactgtgacgccctggacgcggacacgctgcaggcc
caggggcggcgcgcccgcgtcgccggacgcatgatgctcaaacgcgtcatgggcaaggcc
agcttcgccaccttgcaggacaccagcggccgcctgcagctgtatctggaccggggcgtt
ctgggcgacgaaacctacgccgccttcaagtcctgggacatcggcgacatcgtgggcgcc
gagggccaggtcttcaagacacacaagggcgaactgtcgctgcgggtggagtcgctgcgc
ctgctgacgaagtccctgcgcccgctgcccgacaagttccacggcgtcgccgaccaggaa
ttgcgctaccggcagcgctacgtggacctgatcatgaccgaggaaacccgccagaccttc
ctggcgcgcacccgcatcatcaatgccatccgtcaggtcatgaccgaggccgacttcctg
gaagtcgagacgccaatgctgcaccccatccccggcggggcggcggccaaaccgttcatc
acacaccacaatgcgctggacatggagatgtacctgcgcattgcgccggaactttatctc
aagcgactgatcgtcggcggattcgaacgggtgttcgagatcaaccgcaacttccgcaac
gagggggtcagtccgcgccacaacccggaattcacgatgatggaattctatgcggcgtac
accgactaccgctggttgatggactacacagaagggctgatccgggaaaccaccctgcgc
gtctgcggcaccacgagcctgacctaccaggaacgtcccctcgaccttgggcgcgccttc
gaccggctgaccatcaccgaggccatcctgaagtacgcccccacctatgcgccggcacaa
cttcaggacacgggattcctgcgcaccgaattgcgccgcctgggggccgacgtggccggg
ccggcgctggcccatgcggggctgggtgcgctgcaactggccctgttcgaggaaacggcg
gaatcccagctgtggcatccgactttcatcgtcgactatccggtcgaggtttcgccgctg
gcccgtgcctcggacacacagcccggcatcaccgaacgcttcgaactgtttgcctgcggc
cgcgagatcgccaatggcttttccgagctgaacgatccggaggaccaggcggcccgcttc
caggcccaggttgcggcgaaggacgccggcgacgaggaagccatgtactacgacgccgac
tacgtgcgggctctggaatacggcatgccgccgaccgggggctgcggcatcggtatcgac
cgcctggtgatgatgctgaccgacagcgccaatatccgcgacgtcatcctgttcccccac
ctgcgacgggaagactga
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