Castellaniella sp. MT123: ABCV34_08420
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Entry
ABCV34_08420 CDS
T11683
Name
(GenBank) Rne/Rng family ribonuclease
Organism
cast Castellaniella sp. MT123
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GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_ribbon_InsA
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
XAO99899
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Position
1793394..1796267
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AA seq
957 aa
AA seq
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MKRMLFNATHQEELRVAIVDGQKLIDLDIETAGREQRKGNIYKGVITRIEPGLEACFVSY
GEERHGFLPFKEVARSYFKDGVDVRTARIQDALTEGQELIIQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRVEGEDRQELRDTMDQLEIPSGMSMIARTAGIGRSVEELQ
WDLNYLMQLWTAIDGAAKENKAPILIYLESSLVIRAIRDYFSPEIGEILIDTDDIHDQAT
AFMSVVMPDNVNRVKRYRDDVPLFSRFQIEHQIETAYSRTVTLPSGGAIVIDHTEALVAV
DVNSARSTRGADIEETALRTNVEAADEVARQLRLRDLGGLIVIDFIDMEETKNQRAVETR
LRDALHFDRARVQMGKISRFGLMELSRQRLRPALNEGSHVTCPRCTGTGVIRDAESSALH
VLRLLQEEAMKEGTAALHAQVPVDVATFLLNEKRRDISQIESRLKVNLVLIPNKSLETPH
HHIERLRHDDPRLDENKTSFELVQEPEEKLIWQPNKAQETKARPEALVKGIQPAEPAPPH
VERPTKATVPEASPVATPATGTSGGLIKRILGWLTGTAPSTVQTQETPAAQATPARHEDG
RRRNGAGRNGRRPDQRSGGRTERPARAEKSEQPERGERQERPADSRGGSRRERPAEERAA
QQTAKPVVGDEAPQDTTEPRRNRNRRGRGRAHGEDTQDQAGIEAVALTAAASEALPVSEP
TPAPQAPRVALEPIDDDLLEDTTVAGPAVDVDTDGSLDTPDPERKRRRRRGRRGRRGTEA
GESLSAEGQDMTSEQDADIETHETPRFDPEALDAQAQALAHAEETPQAREQSDQPAPTVT
IHEQAPAPALQAELPPEEVKAEALPETAEEPAPAAQATAAASHTPAPAVTVQDRGTHPIV
LPPIDESLQAAGMQMVETRASSASSYTPPATPKPLGRARKTVTKEQDEPLQQVETTH
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatgctattcaatgcgacgcaccaagaagaactacgcgtcgccattgtcgat
ggccagaaattgatcgatctggatatcgaaaccgccgggcgcgaacagcgcaaaggcaac
atctacaaaggcgtcatcacccgcatcgaacccggtctggaagcctgcttcgtcagctat
ggcgaagaacggcacggctttctgcccttcaaggaagtcgcccgcagctacttcaaagac
ggcgtggatgtgcgcacggcgcgcatccaggacgcactgaccgaaggtcaggaactcatc
atccaggtcgaaaaagaagaacgcggcaacaagggcgccgccctgaccacgttcatctcg
ctggctggacgctacctggttctgatgccgaacaatccgcgcgggggcggcgtctcgcgc
cgcgtcgaaggcgaggaccgccaggaactgcgcgacaccatggatcagctggaaatcccc
tccggcatgagcatgatcgcccgcacggcaggcatcggccgcagcgtggaagaactgcaa
tgggacctgaactacctgatgcagctctggaccgccattgacggcgccgccaaggaaaac
aaggcaccgatcctgatctacctggaatccagcctggtgatccgcgccatccgcgattat
ttttcgcccgagatcggcgagatcctgatcgataccgacgacatccacgatcaggccacc
gcattcatgagtgtggtgatgcccgacaacgtcaaccgcgtgaagcgctaccgcgacgac
gtccccctgttttcccgcttccagatcgaacaccagatcgagacggcctattcccgcacg
gttacgctgccctcgggtggcgccatcgtgatcgaccataccgaagcgctggtcgccgtg
gacgtgaactccgcacgttcgacacgcggcgccgacatcgaggaaaccgctctgcgcacc
aacgtcgaagcggccgacgaagtcgcccgccagttgcgcctgcgcgacctgggcggcctg
atcgtgatcgattttatcgacatggaagaaaccaagaaccagcgcgccgtcgaaacacgc
ctgcgcgatgcgctgcatttcgaccgcgcacgcgtgcagatgggcaagatctcgcgcttc
ggcctgatggaactgtcccgccaacgcctgcgccccgccctgaacgaaggctcgcatgtc
acctgcccgcgctgcaccggcaccggcgtgatccgcgacgccgaatccagcgcccttcac
gtcctgcgcctgctgcaggaagaagccatgaaggaaggcacggccgccctgcacgcccag
gtacccgtcgatgtggcgacgttcctgctgaatgaaaagcgccgcgacatcagccagatc
gagtcgcgcctgaaggtcaatctggtgctgattcccaacaaatcgctggaaacgccacac
catcacatcgaacgcctgcgccacgacgacccgcgcctggacgagaacaagaccagcttc
gaactggtccaggagccggaagaaaaactgatctggcaaccgaacaaggcccaggaaacc
aaggcccgtccggaagccctggtcaagggcatccagccggccgagcccgcgccgccccac
gtcgaacggcccaccaaggccaccgtgccagaggccagccctgtggctacgcccgccacc
ggcacctcgggcggcctgatcaagcgcatcctgggttggctgaccggcaccgccccatcc
acagtccagacgcaggaaacgccggcagcgcaggccaccccggcccgccacgaggacgga
cgccgccgcaacggtgccggccgcaacggtcgtcgcccggatcagcgctccggtggccga
accgagcgtcctgcgcgagcggaaaaatccgaacagccggaacgcggcgagcgccaggaa
cggccggctgacagccgtggcggttcgcgacgcgagcgcccggccgaagaacgcgccgcg
caacagacggcgaaacccgtggtcggcgacgaagccccgcaggacacgacggaaccgcgc
cgcaaccgcaaccggcgtggtcgtggccgcgcgcatggcgaagacacgcaggatcaggcc
ggcatcgaagccgtcgccctgacggcggccgcttcggaagccctgccggtgtccgagcca
acccccgccccgcaagcgccccgggtcgccctggaaccgatcgatgacgatctgctggaa
gacaccaccgttgccggtccggccgtggacgtggacaccgacggcagcctggatacaccc
gatccggaacgcaagcgccgccgccgtcgtggtcgccgtggtcgccgtggcaccgaggct
ggcgaatccctgtcggccgaaggccaggacatgacgtcggaacaggacgcggacatcgag
acgcatgaaacaccgcgcttcgatcccgaggccctcgacgcacaggcacaggccctggca
cacgccgaggaaacccctcaagcacgcgaacagtcggaccagccagcaccgacggtgacg
atccacgagcaggctcccgccccggcactgcaggcggaactcccacccgaagaggtcaag
gccgaagctttgcccgagacagccgaagaacccgcgccagccgcccaggcgaccgccgcc
gcgtcccacaccccggcacccgcggtgaccgtacaggatcggggcactcaccctatcgtc
ctgccacccatcgacgaatcgctgcaggccgctggcatgcagatggtggaaacgcgggcc
agctcggcgtcgtcctacacgccgccggccacgcccaagcccctggggcgcgcgcgcaag
acggtcaccaaagagcaggatgaacccctacaacaggtggaaaccacgcactga
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