Castellaniella sp. MT123: ABCV34_09265
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Entry
ABCV34_09265 CDS
T11683
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cast Castellaniella sp. MT123
Pathway
cast03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cast00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABCV34_09265 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cast03400
]
ABCV34_09265 (mutM)
Enzymes [BR:
cast01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ABCV34_09265 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABCV34_09265 (mutM)
DNA repair and recombination proteins [BR:
cast03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABCV34_09265 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF8259
DUF7573
Zn_ribbon_8
Zn_ribbon_6
DZR
Auto_anti-p27
RNHCP
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
XAP00057
LinkDB
All DBs
Position
1983822..1984649
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AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGIATVMPGRILRRLIVHEPRLRWPIPPTLPKTLENTPVVACERRGKYL
LIRFPHGTLIVHLGMSGSLRRVPLDAPLRKHDHVEWVFDDARFLLHDPRRFGAVLWHPAE
AGPIGDHPLLASLGVEPFDPAFTPALLHAGLQAHRQAVKQLLLGGRIVVGVGNIYASESL
YLAEIDPRTPGSRLSRPRSIRLHAAILQTLNQALESGGSTLRDYVNAQGAPGAYFTLHAA
VYERDGQPCPRCGTPIRRIVQGQRATYFCPQCQKR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgccagaagtcgaaacaacgcgtcgtggaattgccacggtcatgcccgga
cggattctgcgccgtctcatcgtgcacgagcccaggctgcgatggcccatcccgcccacc
ctgccgaagacgctggaaaacaccccggtggtggcttgcgaacgccggggaaaataccta
ttgatccgttttccgcatggcacgctgatcgtccatctgggcatgtcggggtcgttgcgc
cgagtgccgctggatgcccccttgcgcaagcacgatcacgtggaatgggtgttcgacgac
gcccgttttctgctgcatgacccgcgccgctttggcgcggtgctgtggcacccggccgaa
gccggcccgatcggcgatcatccgctgctcgcctcgctgggcgtggagcccttcgatcca
gccttcacgccggccttgctgcatgccggcctgcaggcgcaccgccaagcggtcaagcag
ctgctgctgggcgggcgcatcgtcgtgggggtgggcaacatctacgcatccgaatcgctg
tatctggcggaaatcgacccgcgcacaccgggcagccggctgtcacgcccgcgcagcatc
cgcctgcacgccgccatcctgcaaaccctgaaccaggccctggaatcgggcggcagcacg
ctgcgcgattacgtcaatgcgcagggcgcgcccggcgcctatttcacgctgcacgcggcg
gtgtacgagcgggacgggcagccctgcccgcgctgcggcacaccgatccggcgcatcgtg
cagggtcagcgcgccacctatttctgcccgcagtgccagaaacgctga
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