Castellaniella sp. MT123: ABCV34_13465
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Entry
ABCV34_13465 CDS
T11683
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cast Castellaniella sp. MT123
Pathway
cast00300
Lysine biosynthesis
cast00470
D-Amino acid metabolism
cast01100
Metabolic pathways
cast01110
Biosynthesis of secondary metabolites
cast01120
Microbial metabolism in diverse environments
cast01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cast00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABCV34_13465 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABCV34_13465 (dapF)
Enzymes [BR:
cast01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABCV34_13465 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XAP00828
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All DBs
Position
complement(2848741..2849631)
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AA seq
296 aa
AA seq
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MRDNASMIWNFTKMHGAGNDFVVLDGVRQSIQLTPERARALADRHFGIGADQVLLVEDPL
DPEADFRYRIFNADGSEVEHCGNGARCFVRFVHEQGLSKRNPLRAEIATGLIVLHESDDG
LVTVDMGHTWFTPDRLAFDATGLATRPDGGDTLYGLDLPGEASEIWCSLVAISNPHAVVL
VDDTEVYPVGRIGPAIESHRRFAQRVNAGFMQVVDRHHIRLRVYERGAGETLACGTGACA
AAVAGIRRGLLDSPVRVDTHGGTLQIEWNGQTLRMQGTATTVFQGQVDIDALVASR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggataatgcctcgatgatctggaacttcaccaaaatgcatggcgccggcaacgac
ttcgtcgtcctggacggcgtacgccagtccatccagctgacccccgaacgcgcccgcgcc
ctggccgaccgtcatttcggcatcggcgccgaccaggtgctgctggtcgaagatcccctg
gaccccgaagcggatttccgctaccggatcttcaacgccgatggcagcgaagtcgaacac
tgcggcaacggcgcacgctgcttcgtgcgtttcgtccatgaacagggactgtcgaagcgc
aacccgctgcgcgccgagatcgccacagggctcatcgtattgcacgaatccgacgacggc
ctggtcacggtggacatggggcacacctggttcacgcccgaccgcctggccttcgacgcc
accggtctggcgacccggcccgacggcggcgacacgctatacggcctggacctgcccggc
gaggcatccgagatctggtgttccctggtggccatctcgaaccctcatgccgtcgtgctg
gtggacgatacggaagtctatcccgtcggccgcatcggcccggccatcgaaagccatcgg
cgctttgcgcagcgcgtcaatgccgggttcatgcaggtcgtggaccggcaccacatccgc
ctgcgggtctacgaacgcggcgcgggcgaaaccctggcctgcgggacgggcgcctgcgcg
gccgccgtcgccgggatccggcggggtctgctggacagccctgtgcgcgtcgatacccac
ggtggtacgctgcagatcgaatggaacggccagaccctgcggatgcagggcacggccacc
acggtttttcaaggccaggtcgatatcgatgccctggtcgcctcccgctga
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