Castellaniella sp. MT123: ABCV34_15100
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Entry
ABCV34_15100 CDS
T11683
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cast Castellaniella sp. MT123
Pathway
cast03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cast00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABCV34_15100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cast03400
]
ABCV34_15100
Enzymes [BR:
cast01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABCV34_15100
DNA repair and recombination proteins [BR:
cast03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABCV34_15100
Prokaryotic type
ABCV34_15100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XAP01125
LinkDB
All DBs
Position
complement(3198804..3199589)
Genome browser
AA seq
261 aa
AA seq
DB search
MTSPLPDTQVHNAFQDSLHAQIETLPPAWRSTLQAPHLQGIVARLDTMLAERLAAGARIF
PLRPFRALIETPPESVQVVIVGQDPYHGPNQAQGLAFSVPDFCPTPPSLRNMFKELALEY
GDPEQAPRNSLVRWARQGVLLLNTSLTVEAHQPASHAKKGWEHVTDALIMRVLREPRPKV
LLLWGSHAQARRQLMDLQPPAGPVQVLMANHPSPLSALRPPRPFIGCGHFRQANDWLQAH
GESGIDWLLAKVLAAAPGYGG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacctctccgcttcccgacacccaggtccacaacgccttccaggattccctgcacgcg
cagatcgagacactgccgcccgcctggcgatccacgctgcaggcgccgcatctgcagggc
atcgtcgcccggctcgataccatgctggccgaacggctggctgccggcgcgcggatcttt
cccctgcgcccgtttcgcgcgctgatcgaaacgccaccagaatcggtgcaggtcgtgatc
gtgggccaggacccctaccacggcccgaatcaggcccaaggcctggcgttttccgtgccc
gacttctgcccgaccccgcccagcctgcgcaacatgttcaaggaactggcgctggaatac
ggagatccggaacaagccccacgcaacagcctggtccgctgggcacgccagggcgtgctg
ctgctgaacacatccctgacggtcgaggcccaccagcccgcatcccacgcgaaaaagggt
tgggagcacgtcacggatgccctgatcatgcgggtattgcgtgaaccgcgcccgaaagtc
ctgctgctgtggggatcccatgcccaggcccgtcgccagctgatggacctgcagccgccc
gccggcccggtccaggtgctgatggccaaccacccctcgcccctgtcggcgctgcgcccg
cctcgccccttcatcggctgcggccatttccgccaagccaacgactggcttcaggcgcac
ggcgaatcaggcatcgactggctgctcgccaaggtgctcgctgcggccccgggatacgga
ggctga
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