Croceibacter atlanticus: CA2559_03310
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Entry
CA2559_03310 CDS
T01256
Name
(GenBank) Peptidoglycan-binding LysM
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cat
Croceibacter atlanticus
Brite
KEGG Orthology (KO) [BR:
cat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cat01011
]
CA2559_03310
Enzymes [BR:
cat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CA2559_03310
Peptidoglycan biosynthesis and degradation proteins [BR:
cat01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CA2559_03310
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
HTH_7
Motif
Other DBs
NCBI-ProteinID:
EAP87751
UniProt:
A3U684
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Position
complement(761931..763502)
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AA seq
523 aa
AA seq
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MFRYIFITLLIGATSVSAQDSIKKPRKIIQDSTGITMYKSIDTTVVDTKNPEFKRTIPAA
LVRLENKEPLQDIKEAIRVDSLWMAELSNEDIFEELHAKLDSLPYNETVIFDLPTDTLKA
RLAKLNAKTPFNIEYNPSLENVIKSYLKRNKESYERLMAISEYYFPMFEQMLDKYDIPLE
MKYLAIVESALNPRAKSRVGATGLWQFMFSTGKMYDLDVSSYVDERMDPIMATEAACKYL
SKLYDIFEDWDLALAAYNSGPGNVNKAVRRSGGYKNYWNLRPFLPRETAGYVPAFLASMY
IFEYAEEHGFQPKRPEIPYFKTDTIHIKDMITFDQISEVTQLDSGMLEFLNPSYKLGIIP
KIEDEAYYLRLPTEQAGIFVTHENAVYAYAKTELEKREKPLPNLVEANDKVRYRVRSGDV
LGKIAERYGVSVSSIKRWNRLRSNNIRIGQRLTIYPRKPVAATRNSASSSKPITGKVYTV
KSGDSLWSIANKIPGVSVSNLKNWNDISSNSLKPGMRLKLSKG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtttagatatatctttattacgctcctaataggagcaacaagtgttagtgctcaagac
agtattaaaaaaccacgtaagattattcaggattcaacaggaataacaatgtataaaagc
attgatactacagttgtagacacaaaaaacccagagtttaaacgtaccattcctgctgca
ttagtaagacttgaaaataaagaacctttacaggatattaaagaagccatacgtgtagat
tcattgtggatggcagagctttccaacgaagatattttcgaagagcttcacgcaaaatta
gacagtttaccatataacgagacagtaatttttgatttaccaacagacactcttaaagca
cgtttagcaaaacttaacgctaaaacgccttttaatattgaatataatccatctttagag
aacgtcataaaatcgtacttaaaacgaaataaagaaagttacgaacgccttatggctatt
agtgaatattactttcctatgttcgaacaaatgttagacaagtatgacatacctctggaa
atgaaatatttggctattgtggagtctgctcttaatccacgagctaaatctcgcgtagga
gcaactggcttatggcaatttatgttctctaccggtaaaatgtatgacttagatgtgagt
tcttatgtagatgaacgtatggatcctatcatggctacagaagcagcttgtaaatacctt
tctaagctttatgatatttttgaagattgggatttggcactagcagcctacaactcaggt
ccaggtaatgtaaataaagcagtaagacgtagtggcggttataaaaattattggaattta
agaccatttcttccacgagaaacagcaggttatgtgcctgcattcctagcttccatgtat
atttttgaatatgctgaagaacacggctttcaacctaaaaggcctgagattccatacttt
aaaacagatacaattcatataaaagatatgatcacttttgatcaaatttcagaagtaacg
caattagactctggaatgttagagtttttaaacccaagctataaactagggataatacct
aagatagaagacgaagcttactatttaagattgccaacagagcaagcaggaatatttgta
actcatgaaaatgcagtatatgcatatgctaaaacagagttagaaaaaagagagaagccg
ctacctaatttagttgaagctaatgataaggttaggtatcgtgtaagatctggagatgtt
ttaggaaaaattgcagaacgctacggcgttagtgtaagcagtataaaacgctggaacagg
ttacgtagtaataatataagaataggacaacgcctaaccatttatccaagaaagcctgtg
gcagcaaccagaaatagtgctagtagctcaaaacctataacaggaaaagtatatacagtt
aagtctggcgactcactttggagcattgcgaataaaattcctggtgtttcagtttcaaat
cttaaaaattggaacgatattagcagtaattccttgaaaccaggaatgcgactaaaacta
tctaaaggttag
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