Croceibacter atlanticus: CA2559_06705
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Entry
CA2559_06705 CDS
T01256
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cat
Croceibacter atlanticus
Pathway
cat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA2559_06705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cat03019
]
CA2559_06705
Messenger RNA biogenesis [BR:
cat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CA2559_06705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_2
Ribosomal_L22
DUF4199
Phage-MuB_C
Motif
Other DBs
NCBI-ProteinID:
EAP88430
UniProt:
A3U863
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All DBs
Position
1491848..1493416
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AA seq
522 aa
AA seq
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MSTTILYFTIIGVIGVAIGYIIAKMIERSASSKIITDAEKSAATIIKDAKTEGESIKKDK
ILQAKEKFIELKSEHEKVINSREKKMSDAEKRTRDKESKISSELGRNKKLNSELDDKLKD
YNHRIDYLEKKQAEIDKVHTQKVQQLEVISGLSADDAKDQLMESLKETAKTDAMAMIQNT
IEDAKMTAQQEAKKIVINTIQRIGTEEAIDNCVSVFNLESDDVKGRIIGREGRNIRAIEA
ATGVEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARIEEVVKKTRKAIDEE
IIEVGKRTVIDLGIHGLHPELIKMVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGVNA
KLAKRAGLLHDIGKVPETEMETPHAILGMEMAQKYGEKDDVCNAIGAHHDEIEMKSLLSP
IIQVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFTGVKKAYAIQAGRELRVIVESEK
VNDDKASNLSFEISQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagcactacaatactttactttaccattattggcgttataggcgttgcaattgggtat
atcattgctaaaatgatagaaagatctgcatcatctaagatcattacagatgcagaaaaa
tctgcagctacgatcataaaagatgctaaaacagaaggcgaaagcataaagaaagataaa
atacttcaagctaaagaaaagtttatcgagctaaaatctgagcacgaaaaagtaataaac
agtagagagaaaaaaatgtctgatgccgagaaacgcaccagagataaagagtctaaaatt
tctagtgaattaggtagaaataaaaaactaaattcagaattagatgataagctaaaagac
tacaaccatcgtatagactacctagaaaagaagcaggcagaaatagataaagtacacact
caaaaagtacaacagttagaggtaataagtggcctttctgcagatgatgctaaggaccaa
cttatggaatctttaaaggaaacagccaagacagatgcaatggctatgatccaaaatact
attgaagatgccaagatgactgcccaacaagaagctaagaaaattgtaataaatacaata
caacgtataggtacagaagaagcaatagataattgcgtgtctgtatttaacttagagagt
gacgatgtaaaaggacgtattattggtcgtgaaggacgtaatattcgtgctattgaagct
gcaacaggagtagagattattgtagatgacactccagaagctataatactttcttgtttt
gattctgtgcgaagagaagtagctagattatcacttcataaattggtaacagatggaaga
attcacccagcacgaattgaagaggttgttaagaaaacacgtaaagcaattgatgaagag
attatcgaagtaggtaaacgcacagtaatcgatttaggtattcacggtctacatccagaa
cttattaaaatggtaggacgtatgaaataccgttcgtcttacggtcaaaacttattacaa
cactcaagagaggttgcaaaactttgtggtgttatggctgcagagcttggggttaacgca
aaacttgctaaacgtgcaggattattacacgatataggtaaggttccagaaacagaaatg
gaaacaccacacgctattttaggtatggaaatggctcagaaatatggagagaaagatgat
gtgtgtaacgctattggagctcaccatgatgaaatagaaatgaaatctctattatctcca
ataattcaagtgtgtgatgctattagtggtgcaagaccaggcgcgagaagacaggtatta
gattcttatatacaacgtcttaaagacttggaagatatagcatttgggtttacaggtgta
aagaaagcttatgctatacaagctggacgcgagcttcgtgttattgtagaaagcgaaaaa
gtaaatgatgataaagcttcaaacttatcttttgaaatttctcagaaaatacaaacagat
atgacgtatccaggacaagttaaagtaactgttatacgtgaaacacgcgcagtaaatatt
gctaaataa
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