Croceibacter atlanticus: CA2559_10008
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Entry
CA2559_10008 CDS
T01256
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cat
Croceibacter atlanticus
Pathway
cat03420
Nucleotide excision repair
cat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CA2559_10008
03430 Mismatch repair
CA2559_10008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cat03400
]
CA2559_10008
Enzymes [BR:
cat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CA2559_10008
DNA repair and recombination proteins [BR:
cat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CA2559_10008
MMR (mismatch excision repair)
Other MMR factors
CA2559_10008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
nSTAND3
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
EAP86360
UniProt:
A3U974
LinkDB
All DBs
Position
2187153..2189474
Genome browser
AA seq
773 aa
AA seq
DB search
MIDYLKGLNDAQRAPVLQKDGAMIVIAGAGSGKTRVLTMRIAHLMKNGVDPFNILSLTFT
NKAAKEMKKRISEIVGASEAKNLWMGTFHSIFAKILRFEADKLGYPSNFTIYDTQDSQSL
IRAIIKEMHLDKDVYKYKQVYSRISSYKNSLITVKAYFQNPELIEADAMAKRPRLGDIYK
EYVERCFKAGAMDFDDLLLRTNELLNRFPEVLNKYQNRFKYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQRDYDNVEMYRLEQNYRSTKNIVNAANS
IIDKNKTKLDKVVWTANDEGPKIRVNRLINDGEEGRFVASSIFENKMEHQLRNGQFAILY
RTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVISYLRLIANPNDEEALKRVINYP
TRGIGQTTIDKVAIAANHYKRSMFEVMANIDKVDIGVNTGTKNKLKNFVNMIHHFQILNK
ESDAFSVAEAVAKKTGLIQDLKKDGTPEGVARIENVEELLNGIKDFVEGQVELADATGSL
AEFLEDIALATDMDKEVGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQSRYRWGKLIDAEPSRFIEEIDEQYIDWMIPQDDYK
YKPLVSPDLWGDVDKSKFRQTKPKKGTPPPSHKPTDEQLRKLRRLRPTDASKEVQKAAPI
SLSEGQMVEHMRFGKGKVIKIEGVGQDKKAEIDFENGGLKKLLLRFAKLKMLD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgatagattatttaaaaggattaaatgacgcacaacgtgcaccagtactgcaaaaggac
ggtgcaatgattgtgatagcaggtgccggatctggtaaaacaagagtgcttaccatgcgt
atagcacacttaatgaaaaatggggtagacccatttaatattttgtcgcttacgtttact
aacaaagcggcaaaagaaatgaagaaacgtatttctgaaattgttggcgccagtgaagct
aagaatttatggatgggaacctttcactccatatttgcaaagattttaagatttgaagca
gataagttaggatatccttctaacttcactatttatgacactcaagactctcaaagtctt
attcgtgccataataaaagaaatgcatcttgataaagatgtgtataaatacaaacaggtt
tactctcgcatttcatcttataaaaacagtttaattacagttaaggcgtattttcaaaac
ccagaattaattgaagcagatgcgatggcaaaacgcccaagattaggcgatatatacaag
gagtatgtagagcgttgctttaaagcaggcgctatggattttgatgatttgttattaaga
accaatgagcttttaaataggtttcctgaagtgcttaataaatatcaaaaccgttttaaa
tatatattggtagatgagtaccaggatacaaaccactctcagtatcttattgttagagca
ctttcagataaatttcagaatatttgtgtggtaggagatgatgcgcaaagtatttacgcc
tttagaggtgccaatattaataacattctaaactttcaacgggattatgataatgttgaa
atgtaccgactagagcaaaattacagatcaacaaagaacattgtaaacgctgcaaattct
atcatagataaaaacaaaaccaaactagataaagttgtttggactgctaatgatgaaggt
cctaaaattcgtgtaaatagacttataaatgacggtgaagaaggccgttttgttgcaagt
tctatttttgagaataaaatggaacaccaattaagaaatggtcaatttgcaattctttac
cgtacaaatgcgcaatctagagcaatggaagatgcgttgcgtaaaaaagatattccttat
aggatttacggtggtttgtcattttaccagcgtaaggaaattaaagatgtaatttcatac
ttacgtcttattgcaaaccctaatgatgaagaagccttaaaacgtgtaataaattatcca
actcgtggtataggacaaactactatagataaagttgctattgctgccaaccactacaaa
cgctctatgtttgaggttatggctaatatagacaaagtagatattggcgtaaatacagga
actaaaaacaagcttaagaattttgtgaatatgattcaccatttccaaattcttaataaa
gaaagcgatgcgtttagtgtagcagaagctgttgcaaaaaaaacaggtttaattcaggat
cttaaaaaagatggcactccagaaggtgttgcacgtattgagaatgttgaagaactctta
aatggtattaaagattttgttgaaggccaagtagaactagccgatgcaacaggaagtctt
gccgagtttttagaagatattgcacttgctacagatatggataaagaggtaggagatgat
gatcgtgttgcacttatgaccattcacttagccaaaggattagagtttccttatgtatac
atagttggtatggaagaagacttatttcctagtgctatgagtatgaatacaaggtctgaa
cttgaggaagaacgtcgtttattttatgtagcactcactagagcagaaaaacaagcctat
ttaacctacacacaaagtagataccgttggggaaagttaatagatgctgaacctagtaga
tttattgaggaaatagatgaacagtatattgactggatgatacctcaagacgattataag
tataaaccacttgttagcccagatctttggggagacgtagataagagtaaatttagacaa
acaaaacctaaaaagggaacgccaccaccaagtcacaaacctacagatgagcaattaaga
aaacttagaaggttaagacctacagatgcttctaaagaagttcaaaaagcggcaccaatt
tctttatctgaaggacaaatggtagagcatatgcgctttggtaaaggaaaagttattaaa
attgaaggcgttggccaagataaaaaagcagaaatagattttgaaaacggcggtcttaaa
aaactgttgttacgttttgcaaaacttaaaatgttagactaa
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