Croceibacter atlanticus: CA2559_11323
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Entry
CA2559_11323 CDS
T01256
Name
(GenBank) putative sigma factor A
KO
K03086
RNA polymerase primary sigma factor
Organism
cat
Croceibacter atlanticus
Pathway
cat02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cat00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CA2559_11323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cat03021
]
CA2559_11323
Transcription machinery [BR:
cat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CA2559_11323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_20
UPF0122
PgaD
Motif
Other DBs
NCBI-ProteinID:
EAP86623
UniProt:
A3U9Y7
LinkDB
All DBs
Position
2459800..2460666
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AA seq
288 aa
AA seq
DB search
MRQLKITKQVTNRESKSLNNYLQDVSKLDLITAEEEVELAQRIREGDQIALEKLTKANLR
FVVSVAKQYQNQGLRLPDLINEGNVGLVKAAKRFDETRGFKFISYAVWWIRQSILQALAE
HSRVVRLPLNKIGVINKINKTFSYLEQAYERPPSAAEIAKELDMPVSKVKTAMKNSGRSL
SMDAPFQEGENDSNLYDVLKSGESPSPDNNLMQDSLSVEIERALDTLTEREADVIRLNYG
LGGQQPLTLQEIGETFDLSRERVRQIREKGIRRLRHESKSKILKKYLG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaagattaccaagcaggttacaaacagagaatctaaatctttaaataac
tacctgcaagacgttagtaaactagatttaataacggctgaagaagaagttgagttagca
caaagaatacgagaaggtgatcagatagcattagagaagttaacgaaagctaacttacgt
tttgtggtgtctgttgccaagcaataccaaaatcaaggattaagattaccagatttaatt
aacgaaggaaatgttggtttagttaaagccgctaaacgttttgatgaaactcgtggtttt
aaatttatctcttacgccgtatggtggattcgtcaatctatactacaagcactagcagaa
cattctagagttgtacgtttacctttaaataagattggtgttattaacaagattaataaa
acattctcttatttagagcaagcttatgagcgtccgccttctgctgcagaaattgcaaag
gagttagatatgcctgtaagcaaggtgaaaactgcaatgaaaaactctggacgtagcctt
tctatggatgcgccatttcaagaaggtgaaaacgactctaacttatacgatgtattaaag
agtggagaaagcccaagcccagataataacttaatgcaagattctttaagtgttgagata
gagcgtgctctagatacccttacagaacgtgaagcagatgttattagacttaactatggt
cttggaggacaacagccgttaactttacaagaaataggtgaaacttttgatttaagtaga
gagcgtgttcgtcaaattcgtgaaaaaggaattagacgtttgcgtcacgaaagtaagagt
aagatcttaaagaaatacttaggatag
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